ncRNA ID | osa-miRf10206-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - CUACGCUGCCGGUCGAAGACCAGUC - NA |
Stem-loop(if miRNA) |
-AAC     AUC       GAG    A      --   C  AA    -     UUGAAG      UA    A   CA    GAUCA      U     GCUAC   GCUGGUC   GACC GGCAGU  AGU GU  UUCG ACCAC      CAAAUG  CGAG GAU  CUAC     ACUGGU G     |||||   |||||||   |||| ||||||  ||| ||  |||| |||||      ||||||  |||| |||  ||||     |||||| A     CGAUG   UGACCAG   CUGG CCGUCG  UCG CA  GAGC UGGUG      GUUUAC  GCUC CUG  GAUG     UGGCCA G UUGU     --C       AAG    -      CA   C  -G    A     -UUGAG      UA    C   UG    ---AG      A |
Stem-loop sequence | AACGCUACAUCGCUGGUCGAGGACCAGGCAGUAGUCGUAAUUCGACCACUUGAAGCAAAUGUACGAGAGAUCACUACGAUCAACUGGUUGAGAACCGGUGAGUAGGUGUCCCUCGAUCAUUUGGAGUUGUGGUACGAGGACCGCUACGCUGCCGGUCGAAGACCAGUCGUAGCUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK120214.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013040G08, full insert sequence | NA | coding protein | psRNATarget |