ncRNA ID | novel_zma_miR6089 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:231873823-231873972 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647343;SRR2647388;SRR2647389 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCUCCGAGUCCAACGCAAGUAGGG - 24 |
Stem-loop(if miRNA) |
--UA                        -       U                             -CU G    A     ACUUGCGUUGGACUCGGAGAGCUC UGUUGCA GGAUAAGUUUUAGUCCCUCUCAGCAUCGU   A UCUU A     |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||   | ||||     UGAACGCAACCUGAGCCUCUCGAG ACAACGU CCUGUUCAAGAUCAGGGAGAGUCGUAGCA   U AGAA G GGGA                        G       C                             CCC G    A |
Stem-loop sequence | UAACUUGCGUUGGACUCGGAGAGCUCUGUUGCAUGGAUAAGUUUUAGUCCCUCUCAGCAUCGUCUAGUCUUAAGAAAGAGUCCCACGAUGCUGAGAGGGACUAGAACUUGUCCCUGCAACAGGAGCUCUCCGAGUCCAACGCAAGUAGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020539714.1 |
|
2.5 | PREDICTED: Zea mays disease resistance protein RPM1-like (LOC103629015), mRNA | NA | coding protein | psRNATarget |