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BaseInfo

ncRNA ID novel_zma_miR6088
Species Zea mays
Class miRNA
Genome position Chr7:148273839-148273916 [-]
Reference genome RefGen_v4
Source SRR1618883
Length 24
Mature sequence(if miRNA) 1 - UAAGGUUAGACAGAUUGUGGCGCC - 24
Stem-loop(if miRNA) --         G           UCUAUCUAAUCUUA    UUC
  CGCCACAAU UGUCUAACUUU              GUUC   A
  ||||||||| |||||||||||              ||||
  GCGGUGUUA ACAGAUUGGAA              CAAG   A
CC         G           ----------UUUA    CUU
Stem-loop sequence CGCCACAAUGUGUCUAACUUUUCUAUCUAAUCUUAGUUCUUCAAUUCGAACAUUUAAGGUUAGACAGAUUGUGGCGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU961872.1
ncRNA:24   CCGCGGUGUUAGACAGAUUGGAAU   1
  |||*||||||||||*|||||||||
targets:1371   GGCACCACAAUCUGACUAACCUUA   1394

1.5 Zea mays clone 238809 mRNA sequence NA coding protein psRNATarget