ncRNA ID | novel_zma_miR6085 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:171500658-171500822 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647343 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGUGUCUUUGCCGAGUGUGGUCCU - 24 |
Stem-loop(if miRNA) |
--  U U   U         -    -  G        -------   CA              -    CG     G     CUA    U   CG G CUU GCCGAGUGU GGUC CU UGCCGAGU       GUC  GCACUCAGUAAAGA GGCU  UUGCC GGAGC   ACUU A   || | ||| ||||||||| |||| || ||||||||       |||  |||||||||||||| ||||  ||||| |||||   ||||   GC C GAA CGGCUCACA CCAG GA ACGGCUCA       CAG  CGUGAGUCGUUUUU CCGA  AACGG UCUCG   UGAG C AG  U C   -         G    A  A        CAAAAAA   CC              U    --     G     UCG    C |
Stem-loop sequence | CGUGUCUUUGCCGAGUGUGGUCCUGUGCCGAGUGUCCAGCACUCAGUAAAGAGGCUCGUUGCCGGGAGCCUAACUUUACCGAGUGCUGCUCUGGGCAAAGCCUUUUUUGCUGAGUGCCCGACAAAAAACACUCGGCAAAGAGACCGACACUCGGCAAGCCUCGGA |