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BaseInfo

ncRNA ID osa-miRf10205-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUAUGACAUGUGAGUCCCAC - NA
Stem-loop(if miRNA)             C C                           -----------------G   GGCUUGAUUGUAGAGAGAGAUGGAGGGGAGAGG
AAAGUCGGUGGG C CACAUGUCAUACUCUUCCUCUCUCCCU                  CUC                                 A
|||||||||||| | |||||||||||||||||||||||||||                  |||                                 G
UUUUAGCCACCC G GUGUACAGUAUGGGAAGGAGAGAGGGG                  UUA                                 G
            U A                           AAAUAGGGUAUGGAGGAG   GGGGUAGGAUAGAGAGAGAAGAGGGAGGGGAGG
Stem-loop sequence AAAGUCGGUGGGCCCCACAUGUCAUACUCUUCCUCUCUCCCUGCUCGGCUUGAUUGUAGAGAGAGAUGGAGGGGAGAGGAGGGGAGGGGAGGGAGAAGAGAGAGAUAGGAUGGGGAUUGAGGAGGUAUGGGAUAAAGGGGAGAGAGGAAGGGUAUGACAUGUGAGUCCCACCGAUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015792164.1
ncRNA:20   CACCCUGAGUGUACAGUAUG   1
  |||||*||||||||||||||
targets:678   GUGGGCCUCACAUGUCAUAC   697

1.0 PREDICTED: Oryza sativa Japonica Group WAS/WASL-interacting protein family member 1 (LOC9271891), mRNA WAS/WASL-interacting protein family member 1(LOC9271891) coding protein psRNATarget
AK288390.1
ncRNA:20   CACCCUGAGUGUACAGUAUG   1
  |||||||*||||||||||||
targets:1011   GUGGGACCCACAUGUCAUAC   1030

1.5 Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence NA coding protein psRNATarget
AK067443.1
ncRNA:20   CACCCUGAGUGUACAGUAUG   1
  ***||*||||||||||||||
targets:2905   CCUGGUCUCACAUGUCAUAC   2924

3.0 Oryza sativa Japonica Group cDNA clone:J013102L13, full insert sequence NA coding protein psRNATarget