ncRNA ID | osa-miRf10205-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GUAUGACAUGUGAGUCCCAC - NA |
Stem-loop(if miRNA) |
            C C                           -----------------G   GGCUUGAUUGUAGAGAGAGAUGGAGGGGAGAGG AAAGUCGGUGGG C CACAUGUCAUACUCUUCCUCUCUCCCU                  CUC                                 A |||||||||||| | |||||||||||||||||||||||||||                  |||                                 G UUUUAGCCACCC G GUGUACAGUAUGGGAAGGAGAGAGGGG                  UUA                                 G             U A                           AAAUAGGGUAUGGAGGAG   GGGGUAGGAUAGAGAGAGAAGAGGGAGGGGAGG |
Stem-loop sequence | AAAGUCGGUGGGCCCCACAUGUCAUACUCUUCCUCUCUCCCUGCUCGGCUUGAUUGUAGAGAGAGAUGGAGGGGAGAGGAGGGGAGGGGAGGGAGAAGAGAGAGAUAGGAUGGGGAUUGAGGAGGUAUGGGAUAAAGGGGAGAGAGGAAGGGUAUGACAUGUGAGUCCCACCGAUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015792164.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group WAS/WASL-interacting protein family member 1 (LOC9271891), mRNA | WAS/WASL-interacting protein family member 1(LOC9271891) | coding protein | psRNATarget | |||||||||
AK288390.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK067443.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J013102L13, full insert sequence | NA | coding protein | psRNATarget |