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BaseInfo

ncRNA ID	novel_zma_miR6074
Species	Zea mays
Class	miRNA
Genome position	Chr1:108485369-108485547 [-]
Reference genome	RefGen_v4
Source	SRR2647343;SRR2647389;SRR2647390;SRR2647467
Length	24
Mature sequence(if miRNA)	1 - AGAUUCUUUGCAUCUCGGAUGUAA - 24
Stem-loop(if miRNA)	--      C         CUC                                AAG  -   CAAAAACAUAU     UUUGCAACUAAA   ACAUCU GGAUGCAAA   UCUUUUUUACAACCUCUCACAUCCACUACUUG   GC CCA           GAAAA            C   |||||| |||||||||   ||||||||||||||||||||||||||||||||   || |||           |||||            U   UGUAGG UCUACGUUU   AGAGAAAAUGUUGGAGAGUGUAGGUGGUGGAC   CG GGU           CUUUU            C AA      C         CUU                                -CA  A   AUAUUUAUCUU     UUUCAAUAAUUU
Stem-loop sequence	ACAUCUCGGAUGCAAACUCUCUUUUUUACAACCUCUCACAUCCACUACUUGAAGGCCCACAAAAACAUAUGAAAAUUUGCAACUAAACUCUUUAAUAACUUUUUUUCUUCUAUUUAUAUGGAGCACCAGGUGGUGGAUGUGAGAGGUUGUAAAAGAGAUUCUUUGCAUCUCGGAUGUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU945995.1	ncRNA:24   AAUGUAGGCUCUACGUUUCUUAGA   1   ||=||||||=|||||||||||||* targets:307   UUGCAUCCGGGAUGCAAAGAAUCC   330 Target Full Sequence	2.0	Zea mays clone 293035 mRNA sequence	NA	coding protein	psRNATarget
XM_020538633.1	ncRNA:24   AAUGUAGGCUCUACGUUUCUUAGA   1   ||=||||||=|||*|||||||||| targets:3708   UUGCAUCCGGGAUACAAAGAAUCU   3731 Target Full Sequence	2.5	PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008647808.2	ncRNA:24   AAUGUAGGCUCUACGUUUCUUAGA   1   ||=||||||=|||*|||||||||| targets:3821   UUGCAUCCGGGAUACAAAGAAUCU   3844 Target Full Sequence	2.5	PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020538630.1	ncRNA:24   AAUGUAGGCUCUACGUUUCUUAGA   1   ||=||||||=|||*|||||||||| targets:3860   UUGCAUCCGGGAUACAAAGAAUCU   3883 Target Full Sequence	2.5	PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020538631.1	ncRNA:24   AAUGUAGGCUCUACGUUUCUUAGA   1   ||=||||||=|||*|||||||||| targets:4608   UUGCAUCCGGGAUACAAAGAAUCU   4631 Target Full Sequence	2.5	PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020538632.1	ncRNA:24   AAUGUAGGCUCUACGUUUCUUAGA   1   ||=||||||=|||*|||||||||| targets:4609   UUGCAUCCGGGAUACAAAGAAUCU   4632 Target Full Sequence	2.5	PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X4, mRNA	NA	coding protein	psRNATarget
NM_001350089.1	ncRNA:24   AAUGUAGGCUCUACGUUUCUUAGA   1   ||=||||||=|||*|||||||||| targets:5671   UUGCAUCCGGGAUACAAAGAAUCU   5694 Target Full Sequence	2.5	Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), mRNA	NA	coding protein	psRNATarget
XM_020550700.1	ncRNA:24   AA--UGUAGGCUCUACGUUUCUUAGA   1   ||--|*|||=|||||||||||*|||| targets:4273   UUCAAAAUCUGAGAUGCAAAGUAUCU   4298 Target Full Sequence	2.5	PREDICTED: Zea mays small subunit processome component 20 homolog (LOC103649658), mRNA	NA	coding protein	psRNATarget