ncRNA ID | novel_zma_miR6065 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:306166074-306166154 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647343 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCUCUCGGGUUGCGAUGUCCUGUG - 24 |
Stem-loop(if miRNA) |
--   CU       C A    --    G   CACC UC   U   GCU  CGGGUUG G UGUC  CUGU CGC    C  CGG U   |||  ||||||| | ||||  |||| |||    |  ||| G   UGA  GCCCGGC C GCAG  GACA GUG    G  GCC G AG   UU       - -    UU    G   AGAC UU   G |
Stem-loop sequence | GCUCUCGGGUUGCGAUGUCCUGUGCGCCACCCUCCGGUUGGGCCGUUGCAGAGUGGACAGUUGACGCCGGCCCGUUAGUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ080589.1 |
|
2.5 | TSA: Zea mays contig16228, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT066496.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0013G06 mRNA, complete cds | NA | coding protein | psRNATarget |