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BaseInfo

ncRNA ID	novel_zma_miR6061
Species	Zea mays
Class	miRNA
Genome position	Chr1:261138561-261138631 [+]
Reference genome	RefGen_v4
Source	SRR2647343;SRR2647386;SRR2647389
Length	24
Mature sequence(if miRNA)	48 - ACUUUCAUGUGCACCAGAUAUGUU - 71
Stem-loop(if miRNA)	--          A          C   ----     U   CAUAUCUGGU CAUAUGGAAG UUA    AUAUG G   |||||||||| |||||||||| |||    ||||| A   GUAUAGACCA GUGUACUUUC AAU    UAUAC A UU          C          A   CACG     U
Stem-loop sequence	CAUAUCUGGUACAUAUGGAAGCUUAAUAUGUGAAUCAUAUGCACUAAACUUUCAUGUGCACCAGAUAUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008646350.2	ncRNA:24   UUGUAUAGACCACGUGUACUUUCA   1   |||||||||||||||||||||=|* targets:1553   AACAUAUCUGGUGCACAUGAAGGA   1576 Target Full Sequence	2.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC103625944), mRNA	NA	coding protein	psRNATarget
EU964085.1	ncRNA:24   UUGUAUAGACCACGUGUACUUUCA   1   =||||||||||||=|||||||||* targets:1358   GACAUAUCUGGUGUACAUGAAAGC   1381 Target Full Sequence	2.5	Zea mays clone 275778 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
LQ235128.1	ncRNA:24   UUGUAUAGACCACGUGUACUUUCA   1   |||||||||**||||||||||||* targets:10   AACAUAUCUAAUGCACAUGAAAGA   33 Target Full Sequence	3.0	Sequence 1123 from Patent EP2985353	NA	coding protein	psRNATarget
HI402998.1	ncRNA:24   UUGUAUAGACCACGUGUACUUUCA   1   |||||||||**||||||||||||* targets:10   AACAUAUCUAAUGCACAUGAAAGA   33 Target Full Sequence	3.0	Sequence 1123 from Patent EP2074227	NA	coding protein	psRNATarget
JB163459.1	ncRNA:24   UUGUAUAGACCACGUGUACUUUCA   1   |||||||||**||||||||||||* targets:10   AACAUAUCUAAUGCACAUGAAAGA   33 Target Full Sequence	3.0	Sequence 1123 from Patent EP2559767	NA	coding protein	psRNATarget
BT087210.1	ncRNA:24   UUGUAUAGACCACGUGUACUUUCA   1   |||||||||**||||||||||||* targets:284   AACAUAUCUAAUGCACAUGAAAGA   307 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0076O09 mRNA, complete cds	NA	coding protein	psRNATarget
EZ064180.1	ncRNA:24   UUG-----UAUAGACCACGUGUACUUUCA   1   |=|-----=|||=||||*||||||||||| targets:28   AGCCCAUGGUAUUUGGUACACAUGAAAGU   56 Target Full Sequence	2.5	TSA: Zea mays contig65303, mRNA sequence	NA	coding protein	psRNATarget