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BaseInfo

ncRNA ID osa-miRf10203-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CGUGAGGUACCGAUACCUCGAG - NA
Stem-loop(if miRNA)                    C       C    G   ---CAA UCGAACCA
CAAAAAGUACCUCGAGGUA CGGUACC CACG UAC      A        A
||||||||||||||||||| ||||||| |||| |||      |        C
GUUUUUCAUGGAGCUCCAU GCCAUGG GUGC AUG      C        G
                   A       A    A   AUUUAA AAAGGCUA
Stem-loop sequence CAAAAAGUACCUCGAGGUACCGGUACCCCACGGUACCAAAUCGAACCAACGAUCGGAAACAAUUUAGUAACGUGAGGUACCGAUACCUCGAGGUACUUUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015760380.1
ncRNA:22   GAGCUCCAUAGCCAUGGAGUGC   1
  |||||*|||*||||||||||||
targets:1027   CUCGAAGUACCGGUACCUCACG   1048

2.5 PREDICTED: Oryza sativa Japonica Group tropinone reductase homolog At5g06060 (LOC4326949), mRNA tropinone reductase homolog At5g06060(LOC4326949) coding protein psRNATarget
AK065533.1
ncRNA:22   GAGCUCCAUAGCCAUGGAGUGC   1
  =**|||||||||*||||||||*
targets:2275   UAAGAGGUAUCGCUACCUCACC   2296

2.5 Oryza sativa Japonica Group cDNA clone:J013034F12, full insert sequence NA coding protein psRNATarget
XM_015785401.1
ncRNA:22   GAGCUCCAUAGCCAUGGAGUGC   1
  =**|||||||||*||||||||*
targets:2268   UAAGAGGUAUCGCUACCUCACC   2289

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340805 (LOC4340805), transcript variant X1, mRNA uncharacterized LOC4340805(LOC4340805) coding protein psRNATarget