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BaseInfo

ncRNA ID novel_zma_miR6045
Species Zea mays
Class miRNA
Genome position Chr9:21062298-21062393 [+]
Reference genome RefGen_v4
Source SRR2647343;SRR1583943
Length 24
Mature sequence(if miRNA) 73 - AAAACCGCUAGUGAAAAUAUCAUU - 96
Stem-loop(if miRNA) --  C     C                UAUAA           A    
  UG UAUUU CACUGGCGGUUUUCUU     AACUGCCAGUG AAAUA
  || ||||| ||||||||||||||||     ||||||||||| ||||A
  AC AUAAA GUGAUCGCCAAAAGAA     UUGGCGGUCAC UUUAC
UU  U     A                -UUCG           C    
Stem-loop sequence UGCUAUUUCCACUGGCGGUUUUCUUUAUAAAACUGCCAGUGAAAAUAACAUUUCCACUGGCGGUUGCUUAAGAAAACCGCUAGUGAAAAUAUCAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU950653.1
ncRNA:24   UUACUAUAAAAGUGAUCGCCAAAA   1
  ||||*||||||||||=||||||||
targets:4   AAUGCUAUUUUCACUGGCGGUUUU   27

1.5 Zea mays clone 506422 mRNA sequence NA coding protein psRNATarget