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BaseInfo

ncRNA ID	novel_zma_miR6043
Species	Zea mays
Class	miRNA
Genome position	Chr9:94506965-94507014 [-]
Reference genome	RefGen_v4
Source	SRR2647343
Length	22
Mature sequence(if miRNA)	29 - CUGGAUCUCUCUCCCGGGAGGG - 50
Stem-loop(if miRNA)	--  -         --      GA  G   CU GGAUCUCUC  UCCCGG  GG A   || |||||||||  ||||||  ||   GA CCUAGAGAG  AGGGCU  CC C AG  U         GA      -G  C
Stem-loop sequence	CUGGAUCUCUCUCCCGGGAGGGACCCCGUCGGGAAGGAGAGAUCCUAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ113203.1	ncRNA:22   GGGAGGGCCCUCUCUCUAGGUC   1   ||||||||||||*||||||||| targets:194   CCCUCCCGGGAGCGAGAUCCAG   215 Target Full Sequence	1.5	TSA: Zea mays contig48864, mRNA sequence	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:22   GGGAGGGCCCUCUCUCUAGGUC   1   ||||||||||||*||||||||| targets:1122   CCCUCCCGGGAGCGAGAUCCAG   1143 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:22   GGGAGGGCCCUCUCUCUAGGUC   1   ||||||||||||*||||||||| targets:1122   CCCUCCCGGGAGCGAGAUCCAG   1143 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:22   GGGAGGGCCCUCUCUCUAGGUC   1   ||||||||||||*||||||||| targets:2564   CCCUCCCGGGAGCGAGAUCCAG   2585 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget