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BaseInfo

ncRNA ID	ath-miRf10068-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CACCGGUGGAGGAGUGAGAG - NA
Stem-loop(if miRNA)	G          CU    U   AG         CUCC    --CCA    C   UCCU  GACUUCUCAU  UCUU CUU  CCGCCGGUG    AGCU     CCAC GUG    C  ||||||||||  |||| |||  |||||||||    ||||     |||| |||    C  UUGAAGGGUG  AGAG GAG  GGUGGCCAC    UUGA     GGUG CAU    A U          --    U   GA         ---C    CCUUC    C   UACA
Stem-loop sequence	GGACUUCUCAUCUUCUUUCUUAGCCGCCGGUGCUCCAGCUCCACCACCGUGUCCUCCAACAUUACCGUGGCUUCCAGUUCCACCGGUGGAGGAGUGAGAGUGGGAAGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_126395.3	ncRNA:20   GAGAGUGAGGAGGUGGCCAC   1   |||||||||||||||||||| targets:620   CUCUCACUCCUCCACCGGUG   639 Target Full Sequence	0.0	Arabidopsis thaliana nodulin-related protein 1 (NRP1), mRNA	nodulin-related protein 1(NRP1)	coding protein	psRNATarget
AY136477.1	ncRNA:20   GAGAGUGAGGAGGUGGCCAC   1   |||||||||||||||||||| targets:554   CUCUCACUCCUCCACCGGUG   573 Target Full Sequence	0.0	Arabidopsis thaliana unknown protein (At2g03440) mRNA, complete cds	NA	coding protein	psRNATarget
AK227483.1	ncRNA:20   GAGAGUGAGGAGGUGGCCAC   1   |||||||||||||||||||| targets:463   CUCUCACUCCUCCACCGGUG   482 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-11-H10	NA	coding protein	psRNATarget
BT004586.1	ncRNA:20   GAGAGUGAGGAGGUGGCCAC   1   |||||||||||||||||||| targets:408   CUCUCACUCCUCCACCGGUG   427 Target Full Sequence	0.0	Arabidopsis thaliana At2g03440 gene, complete cds	NA	coding protein	psRNATarget
NM_118778.5	ncRNA:20   GAGAGUGAGGAGGUGGCCAC   1   ||||**|||||||||||||| targets:890   CUCUGCCUCCUCCACCGGUG   909 Target Full Sequence	2.0	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT4G26450)	coding protein	psRNATarget
NM_001341799.1	ncRNA:20   GAGAGUGAGGAGGUGGCCAC   1   ||||**|||||||||||||| targets:671   CUCUGCCUCCUCCACCGGUG   690 Target Full Sequence	2.0	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT4G26450)	coding protein	psRNATarget
NM_103823.2	ncRNA:20   GAGAGUGAGGAGGUGGCCAC   1   *|||*||||||||=|||||| targets:587   AUCUAACUCCUCCGCCGGUG   606 Target Full Sequence	2.5	Arabidopsis thaliana hydroxyproline-rich glycoprotein family protein partial mRNA	hydroxyproline-rich glycoprotein family protein(AT1G49330)	coding protein	psRNATarget