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BaseInfo

ncRNA ID	novel_zma_miR6010
Species	Zea mays
Class	miRNA
Genome position	Chr7:39646094-39646158 [+]
Reference genome	RefGen_v4
Source	SRR2647343;SRR2647389
Length	24
Mature sequence(if miRNA)	42 - GAAUUACUGAUCCUGGCACAUACA - 65
Stem-loop(if miRNA)	--A        U   G   C         AUC    AUGUGCUA GAU AGU AUUUAUGUA   G    |||||||| ||| ||| |||||||||   U    UACACGGU CUA UCA UAAGUGCAU   U ACA        C   G   U         GUG
Stem-loop sequence	AAUGUGCUAUGAUGAGUCAUUUAUGUAAUCGUUGUGUACGUGAAUUACUGAUCCUGGCACAUACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ050603.1	ncRNA:24   ACAUACACGGUCCUAGUCAUUAAG   1   ||||*|||||||||||||*||||| targets:7   UGUACGUGCCAGGAUCAGCAAUUC   30 Target Full Sequence	1.5	TSA: Zea mays contig51723, mRNA sequence	NA	coding protein	psRNATarget
XM_020550893.1	ncRNA:24   ACAUACACGGUCCUAGUCAUUAAG   1   ||||*||||||||||||||*|||| targets:510   UGUACGUGCCAGGAUCAGUUAUUC   533 Target Full Sequence	1.5	PREDICTED: Zea mays diacylglycerol O-acyltransferase 2D-like (LOC103650530), mRNA	NA	coding protein	psRNATarget
NM_001159083.2	ncRNA:24   ACAUACACGGUCCUAGUCAUUAAG   1   ||||*||||||||||||||*|||| targets:1040   UGUACGUGCCAGGAUCAGUUAUUC   1063 Target Full Sequence	1.5	Zea mays oxidoreductase (LOC100286195), mRNA	NA	coding protein	psRNATarget
EU976070.1	ncRNA:24   ACAUACACGGUCCUAGUCAUUAAG   1   ||||*||||||||||||||*|||| targets:1041   UGUACGUGCCAGGAUCAGUUAUUC   1064 Target Full Sequence	1.5	Zea mays clone 510496 oxidoreductase mRNA, complete cds	NA	coding protein	psRNATarget
EU975850.1	ncRNA:24   ACAUACACGGUCCUAGUCAUUAAG   1   ||||*||||||||||||||*|||| targets:1231   UGUACGUGCCAGGAUCAGUUAUUC   1254 Target Full Sequence	1.5	Zea mays clone 503046 mRNA sequence	NA	coding protein	psRNATarget
EU940916.1	ncRNA:24   ACAUACACGGUCCUAGUCAUUAAG   1   ||||*||||||||||||||*|||| targets:362   UGUACGUGCCAGGAUCAGUUAUUC   385 Target Full Sequence	1.5	Zea mays clone 1212834 mRNA sequence	NA	coding protein	psRNATarget
EU940954.1	ncRNA:24   ACAUACACGGUCCUAGUCAUUAAG   1   ||||*||||||||||||||*|||| targets:1318   UGUACGUGCCAGGAUCAGUUAUUC   1341 Target Full Sequence	1.5	Zea mays clone 1220838 mRNA sequence	NA	coding protein	psRNATarget