Search result

BaseInfo

ncRNA ID	osa-miRf10198-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UAACUUUAGUCCCGGUUGGUG - NA
Stem-loop(if miRNA)	GUA                           C    ACUUUAGUCCCGGUUGGUGUUAGAUCC G    |||||||||||||||||||||||||||    UGAAAUCAGGGCCAACCACAAUCUAGG G CCC                           G
Stem-loop sequence	GUAACUUUAGUCCCGGUUGGUGUUAGAUCCCGGGGGAUCUAACACCAACCGGGACUAAAGUCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK241906.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   ||||||||||||||||||*|| targets:1779   CACCAACCGGGACUAAAGAUA   1799 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence	NA	coding protein	psRNATarget
AK241906.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||||||||||||||*|= targets:1754   UACCAACCGGGACUAAAGAUG   1774 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence	NA	coding protein	psRNATarget
XM_015755256.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||||||||||||||*|| targets:73   UACCAACCGGGACUAAAGAUA   93 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget
AK288544.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   ||=|||||||||||||||*|| targets:1879   CAUCAACCGGGACUAAAGAUA   1899 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090046G24, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   |*||||||||||||||||*|* targets:2385   CUCCAACCGGGACUAAAGAUC   2405 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   ||||||||||||||||||*|* targets:1766   CACCAACCGGGACUAAAGAUC   1786 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK065349.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||=||||||||||||*| targets:2204   UACCAAUCGGGACUAAAGUGA   2224 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013022H13, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||||||||||||||*|= targets:1391   UACCAACCGGGACUAAAGAUG   1411 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||||||||||||||*|* targets:2403   UACCAACCGGGACUAAAGAUC   2423 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||||||||||||||*|* targets:375   UACCAACCGGGACUAAAGAUC   395 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||||||||||||||*|* targets:928   UACCAACCGGGACUAAAGAUC   948 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288463.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||||||||||||||*|* targets:466   UACCAACCGGGACUAAAGAUC   486 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK288463.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   **||||||||||||||||*|* targets:484   AUCCAACCGGGACUAAAGAUC   504 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK288598.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =|||||||||||||||||*|* targets:1041   UACCAACCGGGACUAAAGAUC   1061 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090051P05, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:21   GUGGUUGGCCCUGAUUUCAAU   1   =*=|||||||||||||||*|| targets:1893   UUUCAACCGGGACUAAAGAUA   1913 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget