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BaseInfo

ncRNA ID	novel_zma_miR5996
Species	Zea mays
Class	miRNA
Genome position	Chr6:122724655-122724748 [+]
Reference genome	RefGen_v4
Source	SRR2647343
Length	22
Mature sequence(if miRNA)	73 - UCGAACUGGUCCCUCGGAGGGU - 94
Stem-loop(if miRNA)	--  -   C  A    C     -----G  AGGGCCGCGUCUCCACCAUC   CC CCG GG ACCA UUCGA      CG                    U   || ||| || |||| |||||      ||   GG GGC CC UGGU AAGCU      GU                    A UG  A   U  C    C     GAUUCA  AGACCACGGCUUCCGCAGCG
Stem-loop sequence	CCCCGCGGAACCACUUCGAGCGAGGGCCGCGUCUCCACCAUCUAGCGACGCCUUCGGCACCAGAUGACUUAGUCGAACUGGUCCCUCGGAGGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546301.1	ncRNA:22   UGGGAGGCUCCCUGGUCAAGCU   1   =||||||||||||||||||||| targets:1993   GCCCUCCGAGGGACCAGUUCGA   2014 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC109943356 (LOC109943356), mRNA	NA	coding protein	psRNATarget
JB169235.1	ncRNA:22   UGGGAGGCUCCCUGGUCAAGCU   1   =||||||||||||||||||=|| targets:10   GCCCUCCGAGGGACCAGUUUGA   31 Target Full Sequence	1.5	Sequence 6899 from Patent EP2559767	NA	coding protein	psRNATarget
HI408774.1	ncRNA:22   UGGGAGGCUCCCUGGUCAAGCU   1   =||||||||||||||||||=|| targets:10   GCCCUCCGAGGGACCAGUUUGA   31 Target Full Sequence	1.5	Sequence 6899 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240904.1	ncRNA:22   UGGGAGGCUCCCUGGUCAAGCU   1   =||||||||||||||||||=|| targets:10   GCCCUCCGAGGGACCAGUUUGA   31 Target Full Sequence	1.5	Sequence 6899 from Patent EP2985353	NA	coding protein	psRNATarget
EU942999.1	ncRNA:22   UGGGAGGCUCCCUGGUCAAGCU   1   *||||||||||||||||||||| targets:81   UCCCUCCGAGGGACCAGUUCGA   102 Target Full Sequence	0.0	Zea mays clone 1551860 mRNA sequence	NA	coding protein	psRNATarget