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BaseInfo

ncRNA ID	novel_zma_miR5979
Species	Zea mays
Class	miRNA
Genome position	Chr5:91767599-91767703 [-]
Reference genome	RefGen_v4
Source	SRR2647343;SRR2647385;SRR2647386;SRR2647388;SRR2647389;SRR2647390;SRR2647391;SRR2647467
Length	24
Mature sequence(if miRNA)	82 - CAGACUGUUCGGUGUGCAUCGGAC - 105
Stem-loop(if miRNA)	--              UG      A       -   AGAGAGAU    AAU    G   CAGACUGUUCGGUG  CAUCGG CAGUUUG UGC        CCGC   CGAG G   ||||||||||||||  |||||| ||||||| |||        ||||   ||||   GUCUGAUAGGUUAC  GUGGCC GUCAGAC ACG        GGCG   GCUC C CG              GU      C       C   ----AUGU    --G    U
Stem-loop sequence	CAGACUGUUCGGUGUGCAUCGGACAGUUUGUGCAGAGAGAUCCGCAAUCGAGGGCUCUCGGGCGGUGUAGCACCAGACUGCCCGGUGUGCAUUGGAUAGUCUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU940974.1	ncRNA:24   CAGGCUACGUGUGGCUUGUCAGAC   1   |||||=|||||||||=|||||||| targets:2766   GUCCGGUGCACACCGGACAGUCUG   2789 Target Full Sequence	2.5	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
JB170340.1	ncRNA:24   CAGGCUACGUGUGGCUUGUCAGAC   1   |||||=||==|||||||||||||| targets:77   GUCCGGUGUGCACCGAACAGUCUG   100 Target Full Sequence	3.0	Sequence 8004 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242009.1	ncRNA:24   CAGGCUACGUGUGGCUUGUCAGAC   1   |||||=||==|||||||||||||| targets:77   GUCCGGUGUGCACCGAACAGUCUG   100 Target Full Sequence	3.0	Sequence 8004 from Patent EP2985353	NA	coding protein	psRNATarget
HI409879.1	ncRNA:24   CAGGCUACGUGUGGCUUGUCAGAC   1   |||||=||==|||||||||||||| targets:77   GUCCGGUGUGCACCGAACAGUCUG   100 Target Full Sequence	3.0	Sequence 8004 from Patent EP2074227	NA	coding protein	psRNATarget
JB169550.1	ncRNA:24   CAGGCUACGUGUGGCUUGUCAGAC   1   ||||*=||||||||*||||||||| targets:191   GUCCAGUGCACACCAAACAGUCUG   214 Target Full Sequence	2.5	Sequence 7214 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241219.1	ncRNA:24   CAGGCUACGUGUGGCUUGUCAGAC   1   ||||*=||||||||*||||||||| targets:191   GUCCAGUGCACACCAAACAGUCUG   214 Target Full Sequence	2.5	Sequence 7214 from Patent EP2985353	NA	coding protein	psRNATarget
HI409089.1	ncRNA:24   CAGGCUACGUGUGGCUUGUCAGAC   1   ||||*=||||||||*||||||||| targets:191   GUCCAGUGCACACCAAACAGUCUG   214 Target Full Sequence	2.5	Sequence 7214 from Patent EP2074227	NA	coding protein	psRNATarget