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BaseInfo

ncRNA ID novel_zma_miR5965
Species Zea mays
Class miRNA
Genome position Chr6:100869498-100869593 [-]
Reference genome RefGen_v4
Source SRR1618883;SRR4237224;SRR5105961
Length 24
Mature sequence(if miRNA) 73 - AUACGAGAUGGACUGACCUAUGGG - 96
Stem-loop(if miRNA) --           A     C              UA     AGCCCUCU
  AUACGAGAUGG CUGAC UAUGGGGGACGAAU  CCUUG        C
  ||||||||||| ||||| ||||||||||||||  |||||        A
  UAUGCUCUACC GACUG AUACCCCCUGUUUA  GGAGC        G
UG           C     -              --     ACAUACCC
Stem-loop sequence AUACGAGAUGGACUGACCUAUGGGGGACGAAUUACCUUGAGCCCUCUCAGCCCAUACACGAGGAUUUGUCCCCCAUAGUCAGCCCAUCUCGUAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539261.1
ncRNA:24   GGGUAUCCAGUCAGGUAGAGCAUA   1
  ||=||||*||||||||||||||=|
targets:375   CCUAUAGAUCAGUCCAUCUCGUGU   398

2.5 PREDICTED: Zea mays uncharacterized LOC103629447 (LOC103629447), mRNA NA coding protein psRNATarget