Search result

BaseInfo

ncRNA ID	novel_zma_miR5964
Species	Zea mays
Class	miRNA
Genome position	Chr4:18298606-18298660 [-]
Reference genome	RefGen_v4
Source	SRR2647343
Length	24
Mature sequence(if miRNA)	1 - GAACUUCGACGAGCAAUUCCGGGA - 24
Stem-loop(if miRNA)	--         U   --       -  AA   CCGGAGUUG CUC  UGGAGUU GG  C   ||||||||| |||  ||||||| ||  C   GGCCUUAAC GAG  GCUUCAA CC  G AG         -   CA       G  CC
Stem-loop sequence	CCGGAGUUGUCUCUGGAGUUGGAACCGCCCCGAACUUCGACGAGCAAUUCCGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU940959.1	ncRNA:24   AGGGCCUUAACGAGCAGCUUCAAG   1   |||||*|||||||||*|||||||| targets:802   UCCCGAAAUUGCUCGCCGAAGUUC   825 Target Full Sequence	2.5	Zea mays clone 1222375 mRNA sequence	NA	coding protein	psRNATarget
BT054656.2	ncRNA:24   AG--GGCCUUAACGAGCAGCUUCAAG   1   ||--||*|||*|||||||||*||||| targets:443   UCUGCCUGAACUGCUCGUCGCAGUUC   468 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0039E05 mRNA, complete cds	NA	coding protein	psRNATarget