ncRNA ID | novel_zma_miR5955 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:223586801-223586980 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR1583942;SRR1583941 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUUUACUCUACUAAUAUAUCGGU - 24 |
Stem-loop(if miRNA) |
--                      GU         UC    U     A  GUAAGAC            C           A       CAAUGU   UAUUUACUCUACUAAUAUAUCG  UUUCAAGUU  AAUU AUCCU UG       UUGAGAGAUAUA AAAAGGGAAAA UUCUAUC      U   ||||||||||||||||||||||  |||||||||  |||| ||||| ||       |||||||||||| ||||||||||| |||||||   AUAAAUGAGAUGGUUAUAUAGU  AAAGUUCAA  UUAG UAGGA AC       AAUUUUCUAUAU UUUUUUCUUUU AAGAUAG      A UA                      AU         GA    -     A  -------            -           -       UAAAAA |
Stem-loop sequence | UAUUUACUCUACUAAUAUAUCGGUUUUCAAGUUUCAAUUUAUCCUAUGGUAAGACUUGAGAGAUAUACAAAAGGGAAAAAUUCUAUCCAAUGUUAAAAAAUGAUAGAAUUUUCUUUUUUUAUAUCUUUUAACAAAGGAUGAUUAGAACUUGAAAUAUGAUAUAUUGGUAGAGUAAAUAAU |