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BaseInfo

ncRNA ID novel_zma_miR5955
Species Zea mays
Class miRNA
Genome position Chr4:223586801-223586980 [+]
Reference genome RefGen_v4
Source SRR2647221;SRR1583942;SRR1583941
Length 24
Mature sequence(if miRNA) 1 - UAUUUACUCUACUAAUAUAUCGGU - 24
Stem-loop(if miRNA) --                      GU         UC    U     A  GUAAGAC            C           A       CAAUGU
  UAUUUACUCUACUAAUAUAUCG  UUUCAAGUU  AAUU AUCCU UG       UUGAGAGAUAUA AAAAGGGAAAA UUCUAUC      U
  ||||||||||||||||||||||  |||||||||  |||| ||||| ||       |||||||||||| ||||||||||| |||||||
  AUAAAUGAGAUGGUUAUAUAGU  AAAGUUCAA  UUAG UAGGA AC       AAUUUUCUAUAU UUUUUUCUUUU AAGAUAG      A
UA                      AU         GA    -     A  -------            -           -       UAAAAA
Stem-loop sequence UAUUUACUCUACUAAUAUAUCGGUUUUCAAGUUUCAAUUUAUCCUAUGGUAAGACUUGAGAGAUAUACAAAAGGGAAAAAUUCUAUCCAAUGUUAAAAAAUGAUAGAAUUUUCUUUUUUUAUAUCUUUUAACAAAGGAUGAUUAGAACUUGAAAUAUGAUAUAUUGGUAGAGUAAAUAAU