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BaseInfo

ncRNA ID novel_zma_miR5954
Species Zea mays
Class miRNA
Genome position Chr4:213665270-213665361 [+]
Reference genome RefGen_v4
Source SRR2647221
Length 24
Mature sequence(if miRNA) 69 - GAUUUGAGUAUGCAUAGUAUAGUC - 92
Stem-loop(if miRNA) UUACCC       AAUUUAAUCG   U  GUGAGCCUGAAAGCUCAACA
      ACUAUAC          UUC GC                    U
      |||||||          ||| ||                    A
      UGAUAUG          UGA GU                    A
-----C       ---AUACGUA   -  UUAGCAAUAUUUAUAAAUAU
Stem-loop sequence UUACCCACUAUACAAUUUAAUCGUUCUGCGUGAGCCUGAAAGCUCAACAUAAUAUAAAUAUUUAUAACGAUUUGAGUAUGCAUAGUAUAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008647073.2
ncRNA:24   CUGAUAUGAUACGUAUGAGUUUAG   1
  **|*|||||||*|||||||||||=
targets:2376   AUCCAUACUAUUCAUACUCAAAUU   2399

2.5 PREDICTED: Zea mays pollen receptor-like kinase 5 (LOC103626677), mRNA NA coding protein psRNATarget