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BaseInfo

ncRNA ID	novel_zma_miR5948
Species	Zea mays
Class	miRNA
Genome position	Chr3:127543812-127543872 [+]
Reference genome	RefGen_v4
Source	SRR2647221
Length	24
Mature sequence(if miRNA)	1 - GAUGUGUGUCUAUCACAAGUGGUU - 24
Stem-loop(if miRNA)	--    U UG C       A       CUU   GAUG G  U UAUCACA GUGGUUC   U   |||| |  | ||||||| |||||||   A   CUAU U  A GUAGUGU CGCCAAG   G CA    C GU U       C       AUA
Stem-loop sequence	GAUGUGUGUCUAUCACAAGUGGUUCCUUUAGAUAGAACCGCCUGUGAUGUAUGUCUAUCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001346990.1	ncRNA:24   UUGGUGAACACUAUCUGUGUGUAG   1   ||||=|*||||||||||||||||| targets:1384   AACCGCCUGUGAUAGACACACAUC   1407 Target Full Sequence	1.0	Zea mays WAT1-related protein (LOC100304260), transcript variant 2, mRNA	NA	coding protein	psRNATarget
XM_008683066.2	ncRNA:24   UUGGUGAACACUAUCUGUGUGUAG   1   ||||=|*||||||||||||||||| targets:1454   AACCGCCUGUGAUAGACACACAUC   1477 Target Full Sequence	1.0	PREDICTED: Zea mays WAT1-related protein (LOC100304260), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT068055.1	ncRNA:24   UUGGUGAACACUAUCUGUGUGUAG   1   ||||=|*||||||||||||||||| targets:1519   AACCGCCUGUGAUAGACACACAUC   1542 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0031N10 mRNA, complete cds	NA	coding protein	psRNATarget
BT086495.1	ncRNA:24   UUGGUGAACACUAUCUGUGUGUAG   1   ||||=|*||||||||||||||||| targets:1593   AACCGCCUGUGAUAGACACACAUC   1616 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0172L11 mRNA, complete cds	NA	coding protein	psRNATarget