Search result

BaseInfo

ncRNA ID	novel_zma_miR5926
Species	Zea mays
Class	miRNA
Genome position	Chr3:197689135-197689188 [-]
Reference genome	RefGen_v4
Source	SRR2647221
Length	22
Mature sequence(if miRNA)	1 - CCGUCGGAGAUAAGCUUAUGUC - 22
Stem-loop(if miRNA)	--           G          U U   CAUAAGCUUAU UCCGACGGCU G C   ||||||||||| |||||||||| | U   GUAUUCGAAUA AGGCUGCCGA C G CU           G          - A
Stem-loop sequence	CAUAAGCUUAUGUCCGACGGCUUGUCUGACAGCCGUCGGAGAUAAGCUUAUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI405856.1	ncRNA:22   CUGUAUU-CGAAUAGAGGCUGCC   1   ||*|||=-||||||||||||||| targets:48   GAAAUAGUGCUUAUCUCCGACGG   70 Target Full Sequence	3.0	Sequence 3981 from Patent EP2074227	NA	coding protein	psRNATarget
HI405856.1	ncRNA:22   CUGUAUUCGAAUAGAGGCUGCC   1   ||*|||||*||||*|||||||| targets:10   GAGAUAAGGUUAUGUCCGACGG   31 Target Full Sequence	2.5	Sequence 3981 from Patent EP2074227	NA	coding protein	psRNATarget
JB166317.1	ncRNA:22   CUGUAUU-CGAAUAGAGGCUGCC   1   ||*|||=-||||||||||||||| targets:48   GAAAUAGUGCUUAUCUCCGACGG   70 Target Full Sequence	3.0	Sequence 3981 from Patent EP2559767	NA	coding protein	psRNATarget
JB166317.1	ncRNA:22   CUGUAUUCGAAUAGAGGCUGCC   1   ||*|||||*||||*|||||||| targets:10   GAGAUAAGGUUAUGUCCGACGG   31 Target Full Sequence	2.5	Sequence 3981 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237986.1	ncRNA:22   CUGUAUU-CGAAUAGAGGCUGCC   1   ||*|||=-||||||||||||||| targets:48   GAAAUAGUGCUUAUCUCCGACGG   70 Target Full Sequence	3.0	Sequence 3981 from Patent EP2985353	NA	coding protein	psRNATarget
LQ237986.1	ncRNA:22   CUGUAUUCGAAUAGAGGCUGCC   1   ||*|||||*||||*|||||||| targets:10   GAGAUAAGGUUAUGUCCGACGG   31 Target Full Sequence	2.5	Sequence 3981 from Patent EP2985353	NA	coding protein	psRNATarget