ncRNA ID | novel_zma_miR5921 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:231681561-231681672 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647389;SRR2647390;SRR2647391 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAUUUAUUUUACUAUUGGUAUUU - 24 |
Stem-loop(if miRNA) |
--   U  A        UU   -   UUAU     U  -AU AA    U       GC   AGA UU UUUUACUA  GGU AUU    UGGGU GA   C  GGUA UGCUUGG  A   ||| || ||||||||  ||| |||    ||||| ||   |  |||| |||||||   UCU AA AGAAUGAU  CCA UGG    ACCCA CU   G  UUAU ACGAGCC  A AC   U  C        --   G   UCUU     C  CCU GG    U       GG |
Stem-loop sequence | AGAUUUAUUUUACUAUUGGUAUUUUAUUGGGUUGAAUCAAGGUAUUGCUUGGGCAAGGCCGAGCAUUAUUGGGUCCUCCACCCAUUCUGGUGACCUAGUAAGACAAUUCUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008673740.2 |
|
3.0 | PREDICTED: Zea mays probable 3-hydroxyisobutyryl-CoA hydrolase 3 (LOC103649476), mRNA | NA | coding protein | psRNATarget |