ncRNA ID | novel_zma_miR5914 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:114848952-114849086 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647343;SRR2647389 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCUCUGGUCAGGCGCGGACUGUCC - 24 |
Stem-loop(if miRNA) |
U    --GG     -            GC     AAA   --    G       A      GC   -   G  CUCU    UCAGG CGCGGACUGUCC  GGCCC   GCC  GGAC GUCCGCG CCUGGC  GAG GCG C  ||||    ||||| ||||||||||||  |||||   |||  |||| ||||||| ||||||  ||| |||  GAGG    GGUCC GUGCCUGGCAGG  CCGGG   CGG  CCUG CAGGCGC GGACUG  CUC CGU G C    ACGU     A            --     ACA   CG    G       -      GU   U   G |
Stem-loop sequence | UCUCUGGUCAGGCGCGGACUGUCCGCGGCCCAAAGCCGGACGGUCCGCGACCUGGCGCGAGGCGGCGGUGCUCUCUGGUCAGGCGCGGACGGUCCGCGGCACAGGGCCGGACGGUCCGUGACCUGGUGCAGGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ096610.1 |
|
1.5 | TSA: Zea mays contig32265, mRNA sequence | NA | coding protein | psRNATarget |