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BaseInfo

ncRNA ID novel_zma_miR5914
Species Zea mays
Class miRNA
Genome position Chr2:114848952-114849086 [+]
Reference genome RefGen_v4
Source SRR2647221;SRR2647343;SRR2647389
Length 24
Mature sequence(if miRNA) 1 - UCUCUGGUCAGGCGCGGACUGUCC - 24
Stem-loop(if miRNA) U    --GG     -            GC     AAA   --    G       A      GC   -   G
 CUCU    UCAGG CGCGGACUGUCC  GGCCC   GCC  GGAC GUCCGCG CCUGGC  GAG GCG C
 ||||    ||||| ||||||||||||  |||||   |||  |||| ||||||| ||||||  ||| |||
 GAGG    GGUCC GUGCCUGGCAGG  CCGGG   CGG  CCUG CAGGCGC GGACUG  CUC CGU G
C    ACGU     A            --     ACA   CG    G       -      GU   U   G
Stem-loop sequence UCUCUGGUCAGGCGCGGACUGUCCGCGGCCCAAAGCCGGACGGUCCGCGACCUGGCGCGAGGCGGCGGUGCUCUCUGGUCAGGCGCGGACGGUCCGCGGCACAGGGCCGGACGGUCCGUGACCUGGUGCAGGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   CCUGUCAGGCGCGGACUGGUCUCU   1
  ||||*|||||||=|||||||||||
targets:24   GGACCGUCCGCGUCUGACCAGAGA   47

1.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget