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BaseInfo

ncRNA ID novel_zma_miR5908
Species Zea mays
Class miRNA
Genome position Chr2:40347022-40347113 [+]
Reference genome RefGen_v4
Source SRR2647221
Length 24
Mature sequence(if miRNA) 69 - GAUUUGAGUAUGCAUAGUAUAGUC - 92
Stem-loop(if miRNA) UUACCC     A  -      -        CG    CCUGAAAGCUC
      ACUAU CA AUUUAA UCGUUCUG  UGAG           A
      ||||| || |||||| ||||||||  ||||
      UGAUA GU UGAGUU AGCAAGAU  UUAU           A
CUGAUA     C  A      U        --    AAAUAUAAUAC
Stem-loop sequence UUACCCACUAUACAAUUUAAUCGUUCUGCGUGAGCCUGAAAGCUCAACAUAAUAUAAAUAUUUAGAACGAUUUGAGUAUGCAUAGUAUAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008647073.2
ncRNA:24   CUGAUAUGAUACGUAUGAGUUUAG   1
  **|*|||||||*|||||||||||=
targets:2376   AUCCAUACUAUUCAUACUCAAAUU   2399

2.5 PREDICTED: Zea mays pollen receptor-like kinase 5 (LOC103626677), mRNA NA coding protein psRNATarget