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BaseInfo

ncRNA ID	novel_zma_miR5902
Species	Zea mays
Class	miRNA
Genome position	Chr10:59983252-59983373 [-]
Reference genome	RefGen_v4
Source	SRR2647221;SRR2647343;SRR2647387;SRR2647391;SRR2647467
Length	24
Mature sequence(if miRNA)	99 - AAAGCUAGUUUGGAAACUCAAAUU - 122
Stem-loop(if miRNA)	--               A               GG    A    ----------------      AGA   AAAGCUAGUUUGGAA CUCAAAUUUUCUUUG  AUUA AGGA                AACUAG   A   ||||||||||||||| |||||||||||||||  |||| ||||                ||||||   UUUCGAUCAAACCUU GAGUUUAGGAGAAAC  UAAU UCCU                UUGAUU   C AA               G               UU    C    CUAACCCCACUUUUAA      AAA
Stem-loop sequence	AAAGCUAGUUUGGAAACUCAAAUUUUCUUUGGGAUUAAAGGAAACUAGAGAACAAAUUAGUUAAUUUUCACCCCAAUCUCCUCUAAUUUCAAAGAGGAUUUGAGGUUCCAAACUAGCUUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550081.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGAAA   1   ||||||||||||||||||||||*| targets:2430   AAUUUGAGUUUCCAAACUAGCUCU   2453 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109944788 (LOC109944788), mRNA	NA	coding protein	psRNATarget
XM_008676335.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGAAA   1   =|||||||||||||||||||||*| targets:4404   GAUUUGAGUUUCCAAACUAGCUCU   4427 Target Full Sequence	1.5	PREDICTED: Zea mays Serine/arginine repetitive matrix protein 2 isoform 4 (LOC103650763), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008676333.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGAAA   1   =|||||||||||||||||||||*| targets:4391   GAUUUGAGUUUCCAAACUAGCUCU   4414 Target Full Sequence	1.5	PREDICTED: Zea mays Serine/arginine repetitive matrix protein 2 isoform 4 (LOC103650763), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008676336.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGAAA   1   =|||||||||||||||||||||*| targets:4377   GAUUUGAGUUUCCAAACUAGCUCU   4400 Target Full Sequence	1.5	PREDICTED: Zea mays Serine/arginine repetitive matrix protein 2 isoform 4 (LOC103650763), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020543794.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGAAA   1   =||||*|*|||||||||||||||| targets:4283   GAUUUAAAUUUCCAAACUAGCUUU   4306 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100384809 (TIDP3498), transcript variant X1, mRNA	NA	coding protein	psRNATarget