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BaseInfo

ncRNA ID	novel_zma_miR5895
Species	Zea mays
Class	miRNA
Genome position	Chr6:171113467-171113551 [-]
Reference genome	RefGen_v4
Source	SRR1618883
Length	24
Mature sequence(if miRNA)	62 - CCUAAAACCGACGGGAAUAAGCCC - 85
Stem-loop(if miRNA)	--   A                                   U   CCU AAACCGACGGGAAUAAGCCCUAAACCGACGGGAAU A   ||| ||||||||||||||||||||||||||||||||||| C   GGA UUUGGCUGCUCUUAUUCGGGAUUUGGCUGCCCUUA U CC   C                                   U
Stem-loop sequence	CCUAAAACCGACGGGAAUAAGCCCUAAACCGACGGGAAUUACUUAUUCCCGUCGGUUUAGGGCUUAUUCUCGUCGGUUUCAGGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ106807.1	ncRNA:24   CCCGAAUAAGGGCAGCCAAAAUCC   1   *||||||||||||||||||||||| targets:26   AGGCUUAUUCCCGUCGGUUUUAGG   49 Target Full Sequence	0.0	TSA: Zea mays contig42465, mRNA sequence	NA	coding protein	psRNATarget
EU970148.1	ncRNA:24   CCCGAAUAAGGGCAGCCAAAAUCC   1   *||||||||||||||||||||||| targets:1036   AGGCUUAUUCCCGUCGGUUUUAGG   1059 Target Full Sequence	0.0	Zea mays clone 340887 cysteine protease 1 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157821.1	ncRNA:24   CCCGAAUAAGGGCAGCCAAAAUCC   1   *||||||||||||||||||||||| targets:1036   AGGCUUAUUCCCGUCGGUUUUAGG   1059 Target Full Sequence	0.0	Zea mays cysteine protease 1 (LOC100284926), mRNA	NA	coding protein	psRNATarget
EU964088.1	ncRNA:24   CCCGAAUAAGGGCA-GCCAAAAUCC   1   *|||||||||||||-|||||||||| targets:638   AGGCUUAUUCCCGUUCGGUUUUAGG   662 Target Full Sequence	3.0	Zea mays clone 275785 mRNA sequence	NA	coding protein	psRNATarget