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BaseInfo

ncRNA ID	novel_zma_miR5892
Species	Zea mays
Class	miRNA
Genome position	Chr2:16642197-16642254 [+]
Reference genome	RefGen_v4
Source	SRR2647221
Length	24
Mature sequence(if miRNA)	35 - AAUUUAUUCUCAUUUUAGACAAUG - 58
Stem-loop(if miRNA)	--AA         A         A  AAA     GUUUGGAAU GAGGAUGAA UG   G     ||||||||| ||||||||| ||   A     CAGAUUUUA CUCUUAUUU AC   G GUAA         -         A  GUC
Stem-loop sequence	AAGUUUGGAAUAGAGGAUGAAAUGAAAGAGCUGCAAUUUAUUCUCAUUUUAGACAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU965601.1	ncRNA:24   GUAACAGAUUUUACUCUUAUUUAA   1   ****||||===||||||||||||| targets:1333   AUAAGUCUGGGAUGAGAAUAAAUU   1356 Target Full Sequence	3.0	Zea mays clone 287339 sucrose cleavage protein-like mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138876.1	ncRNA:24   GUAACAGAUUUUACUCUUAUUUAA   1   *|**||||===||||||||||||| targets:1325   AAAAGUCUGGGAUGAGAAUAAAUU   1348 Target Full Sequence	3.0	Zea mays uncharacterized LOC100193791 (LOC100193791), mRNA	NA	coding protein	psRNATarget
BT036152.1	ncRNA:24   GUAACAGAUUUUACUCUUAUUUAA   1   *|**||||===||||||||||||| targets:1325   AAAAGUCUGGGAUGAGAAUAAAUU   1348 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0098L05 mRNA, complete cds	NA	coding protein	psRNATarget
EZ106350.1	ncRNA:24   GUAACAGAUUUUACUCUUAUUUAA   1   *|**||||===||||||||||||| targets:222   AAAAGUCUGGGAUGAGAAUAAAUU   245 Target Full Sequence	3.0	TSA: Zea mays contig42008, mRNA sequence	NA	coding protein	psRNATarget
BT033630.1	ncRNA:24   GUAACAGAUUUUACUCUUAUUUAA   1   =|***|||=||||||||||||||* targets:1099   UAGAAUCUGAAAUGAGAAUAAAUG   1122 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0115P22 mRNA, complete cds	NA	coding protein	psRNATarget