ncRNA ID | novel_zma_miR5890 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:157653005-157653154 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647386;SRR2647387 |
Length | 24 |
Mature sequence(if miRNA) | 127 - GGUGUGGUCUAGAUUGAUUUUGCU - 150 |
Stem-loop(if miRNA) |
--           C          C           C      ------------------------    A   A   UCUCCACG   CAAAAUCAAUC AGACCACACC UCCACAUCCAA GGUGCU                        UGUA AGA GCC        C   ||||||||||| |||||||||| ||||||||||| ||||||                        |||| ||| |||        C   GUUUUAGUUAG UCUGGUGUGG AGGUGUAGGUU CCACGA                        ACAU UCU CGG        U UC           A          A           A      UAUAGUUCCCCUCAAAAAAAAUUU    G   -   UCUCACCU |
Stem-loop sequence | CAAAAUCAAUCCAGACCACACCCUCCACAUCCAACGGUGCUUGUAAAGAAGCCUCUCCACGCCUUCCACUCUGGCUCUGUACAUUUAAAAAAAACUCCCCUUGAUAUAGCACCAUUGGAUGUGGAAGGUGUGGUCUAGAUUGAUUUUGCU |