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BaseInfo

ncRNA ID novel_zma_miR5890
Species Zea mays
Class miRNA
Genome position Chr2:157653005-157653154 [+]
Reference genome RefGen_v4
Source SRR2647221;SRR2647386;SRR2647387
Length 24
Mature sequence(if miRNA) 127 - GGUGUGGUCUAGAUUGAUUUUGCU - 150
Stem-loop(if miRNA) --           C          C           C      ------------------------    A   A   UCUCCACG
  CAAAAUCAAUC AGACCACACC UCCACAUCCAA GGUGCU                        UGUA AGA GCC        C
  ||||||||||| |||||||||| ||||||||||| ||||||                        |||| ||| |||        C
  GUUUUAGUUAG UCUGGUGUGG AGGUGUAGGUU CCACGA                        ACAU UCU CGG        U
UC           A          A           A      UAUAGUUCCCCUCAAAAAAAAUUU    G   -   UCUCACCU
Stem-loop sequence CAAAAUCAAUCCAGACCACACCCUCCACAUCCAACGGUGCUUGUAAAGAAGCCUCUCCACGCCUUCCACUCUGGCUCUGUACAUUUAAAAAAAACUCCCCUUGAUAUAGCACCAUUGGAUGUGGAAGGUGUGGUCUAGAUUGAUUUUGCU