ncRNA ID | novel_zma_miR5887 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:124750886-124750986 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647221 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGACUGUCGCUAUAAAUAGAGAA - 24 |
Stem-loop(if miRNA) |
--    -CU       UA           CUC U   A        CG  A  G   ACGA   GUCGCUA  AAUAGAGAAUU   G CGA CUGUUAGU  GU AU U   ||||   |||||||  |||||||||||   | ||| ||||||||  || ||   UGCU   UAGCGAU  UUAUUUCUUAA   C GCU GACGAUCA  CA UG G AC    AAU       --           --U -   -        AA  C  A |
Stem-loop sequence | ACGACUGUCGCUAUAAAUAGAGAAUUCUCGUCGAACUGUUAGUCGGUAAUGUGAGUCACAAACUAGCAGUCGCUAAUUCUUUAUUUAGCGAUUAAUCGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008655229.2 |
|
1.5 | PREDICTED: Zea mays flowering-promoting factor 1-like protein 5 (LOC103633548), mRNA | NA | coding protein | psRNATarget |