ncRNA ID | osa-miRf10184-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GUCCUCGUCCUAGGUGAAAC - NA |
Stem-loop(if miRNA) |
                 U               CA     AUU   U  G GUGGUUGUUUCAUCUAG AUGAGGACGUGGCAU  UAUUA   UCG GC A ||||||||||||||||| |||||||||||||||  |||||   ||| || CACCAACAAAGUGGAUC UGCUCCUGUACUGUA  AUAAU   AGU CG U                  C               AG     ---   -  G |
Stem-loop sequence | GUGGUUGUUUCAUCUAGUAUGAGGACGUGGCAUCAUAUUAAUUUCGUGCGAUGGCUGAUAAUAGAAUGUCAUGUCCUCGUCCUAGGUGAAACAACCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015768630.1 |
|
0.0 | PREDICTED: Oryza sativa Japonica Group transmembrane protein 56-B (LOC4327490), transcript variant X5, mRNA | transmembrane protein 56-B(LOC4327490) | coding protein | psRNATarget | |||||||||
AK288741.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090064C14, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015755469.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group transcription factor MYB30-like (LOC107276247), mRNA | transcription factor MYB30-like(LOC107276247) | coding protein | psRNATarget |