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BaseInfo

ncRNA ID osa-miRf10184-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUCCUCGUCCUAGGUGAAAC - NA
Stem-loop(if miRNA)                  U               CA     AUU   U  G
GUGGUUGUUUCAUCUAG AUGAGGACGUGGCAU  UAUUA   UCG GC A
||||||||||||||||| |||||||||||||||  |||||   ||| ||
CACCAACAAAGUGGAUC UGCUCCUGUACUGUA  AUAAU   AGU CG U
                 C               AG     ---   -  G
Stem-loop sequence GUGGUUGUUUCAUCUAGUAUGAGGACGUGGCAUCAUAUUAAUUUCGUGCGAUGGCUGAUAAUAGAAUGUCAUGUCCUCGUCCUAGGUGAAACAACCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015768630.1
ncRNA:20   CAAAGUGGAUCCUGCUCCUG   1
  ||||||||||||||||||||
targets:298   GUUUCACCUAGGACGAGGAC   317

0.0 PREDICTED: Oryza sativa Japonica Group transmembrane protein 56-B (LOC4327490), transcript variant X5, mRNA transmembrane protein 56-B(LOC4327490) coding protein psRNATarget
AK288741.1
ncRNA:20   CAAAGUGGAUCCUGCUCCUG   1
  ||||=|||||||||*|||||
targets:4283   GUUUUACCUAGGACCAGGAC   4302

2.5 Oryza sativa Japonica Group cDNA, clone: J090064C14, full insert sequence NA coding protein psRNATarget
XM_015755469.1
ncRNA:20   CAAAGUGGAUCCUGCUCCUG   1
  |*||||||*|||||||||||
targets:333   GCUUCACCGAGGACGAGGAC   352

2.5 PREDICTED: Oryza sativa Japonica Group transcription factor MYB30-like (LOC107276247), mRNA transcription factor MYB30-like(LOC107276247) coding protein psRNATarget