Search result

BaseInfo

ncRNA ID novel_zma_miR5866
Species Zea mays
Class miRNA
Genome position Chr1:226372557-226372663 [-]
Reference genome RefGen_v4
Source SRR2647221;SRR2647385;SRR2647390;SRR2647391
Length 24
Mature sequence(if miRNA) 1 - CUCCAAUACUCUUGUUUCCAAACA - 24
Stem-loop(if miRNA) --        A              G  -  GAAAGAGUUAUAAUAUCUUACUA
  UUUGGAAG AGGAGUAUUGGAGG GA UC                       U
  |||||||| |||||||||||||| || ||
  AAACCUUU UUCUCAUAACCUCU UU AU                       U
AC        G              G  G  AUUAGAGAACAAUAAAUUAAAAC
Stem-loop sequence UUUGGAAGAAGGAGUAUUGGAGGGGAUCGAAAGAGUUAUAAUAUCUUACUAUUCAAAAUUAAAUAACAAGAGAUUAUAGUUGUCUCCAAUACUCUUGUUUCCAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU958579.1
ncRNA:24   ACAAACCUUUGUUCUCAUAACCUC   1
  |||||||||=*|||||||||||||
targets:21   UGUUUGGAAGAAAGAGUAUUGGAG   44

2.0 Zea mays clone 1703813 hypothetical protein mRNA, complete cds NA coding protein psRNATarget