ncRNA ID | novel_zma_miR5866 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:226372557-226372663 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647385;SRR2647390;SRR2647391 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUCCAAUACUCUUGUUUCCAAACA - 24 |
Stem-loop(if miRNA) |
--        A              G  -  GAAAGAGUUAUAAUAUCUUACUA   UUUGGAAG AGGAGUAUUGGAGG GA UC                       U   |||||||| |||||||||||||| || ||   AAACCUUU UUCUCAUAACCUCU UU AU                       U AC        G              G  G  AUUAGAGAACAAUAAAUUAAAAC |
Stem-loop sequence | UUUGGAAGAAGGAGUAUUGGAGGGGAUCGAAAGAGUUAUAAUAUCUUACUAUUCAAAAUUAAAUAACAAGAGAUUAUAGUUGUCUCCAAUACUCUUGUUUCCAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU958579.1 |
|
2.0 | Zea mays clone 1703813 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |