Search result

BaseInfo

ncRNA ID	osa-miRf10183-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UCCCGGUUGAAAAACCGGGACUA - NA
Stem-loop(if miRNA)	U              A            C   A     UUA  CUUUAGUCCCGGUU UUUCAACCGGGA UAA GAUCU   G  |||||||||||||| |||||||||||| ||| |||||  GAAAUCAGGGCCAA AAAGUUGGCCCU AUU CUAGG   U G              -            C   C     CCC
Stem-loop sequence	UCUUUAGUCCCGGUUAUUUCAACCGGGACUAAAGAUCUUUAGUCCCGGAUCCUUACUCCCGGUUGAAAAACCGGGACUAAAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK241906.1	ncRNA:23   AUCAGGGCCAAAAAGUUGGCCCU   1   |||||=||||||||||||||||| targets:1661   UAGUCUCGGUUUUUCAACCGGGA   1683 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:23   AUCAGGGCCAA-AAAGUUGGCCCU   1   |||||||||||-|||||||||||| targets:1881   UAGUCCCGGUUAUUUCAACCGGGA   1904 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:23   AUCAGGGCCAA-AAAGUUGGCCCU   1   |||||||||||-|||||||||||| targets:2412   UAGUCCCGGUUAUUUCAACCGGGA   2435 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK242216.1	ncRNA:23   AUCAGGGCCAAAAAGUUGGCCCU   1   |||||||||||||*||||||||| targets:592   UAGUCCCGGUUUUCCAACCGGGA   614 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:23   AUCAGGGCCAAAAAGUUGGCCCU   1   |||||||||||||*||||||||| targets:1292   UAGUCCCGGUUUUCCAACCGGGA   1314 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK100339.1	ncRNA:23   AUCAGGGCCAAAAAGUUGGCCCU   1   ||*||||||||||*||||||||| targets:2035   UAAUCCCGGUUUUCCAACCGGGA   2057 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023081I19, full insert sequence	NA	coding protein	psRNATarget
XM_015759291.1	ncRNA:23   AUCAGGGCCAAAAAGUUGGCCCU   1   ||*||||||||||*||||||||| targets:2034   UAAUCCCGGUUUUCCAACCGGGA   2056 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group proline-rich receptor-like protein kinase PERK4 (LOC4347953), mRNA	proline-rich receptor-like protein kinase PERK4(LOC4347953)	coding protein	psRNATarget