ncRNA ID | novel_zma_miR5848 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:92113123-92113209 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR1583942 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UAUCUCUUCUGAUGUUCAUGAG - 22 |
Stem-loop(if miRNA) |
--    GU  -     U    GCAAGAUUG  U     -  UCGCA   CAUG  CG CAGGA GGGA         GC CAUGG GA     G   ||||  || ||||| ||||         || ||||| ||   GUAC  GU GUCUU CUCU         CG GUACC CU     C GA    UU  A     -    --AUAAGGA  U     U  UCUUU |
Stem-loop sequence | CAUGGUCGCAGGAUGGGAGCAAGAUUGGCUCAUGGGAUCGCAGCUUUCUUCUCCAUGUGCAGGAAUAUCUCUUCUGAUGUUCAUGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ055311.1 |
|
2.5 | TSA: Zea mays contig56433, mRNA sequence | NA | coding protein | psRNATarget |