| ncRNA ID | novel_zma_miR5843 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr8:31120054-31120190 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR1583941;SRR2647387;SRR2647390;SRR2647467 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAUCUGGUGCAUCCAUUUCGCAUC - 24 |
| Stem-loop(if miRNA) |
-- C CUAA AA ---- C UA UUCC AAUCUGGUGCAUCCAUUU GCAU CAAC CACCA AUUUUGUGAAG ACCCCU CACC U |||||||||||||||||| |||| |||| ||||| ||||||||||| |||||| |||| UUAGACCACGUAGGUAGA CGUA GUUG GUGGU UAAAAUGCUUC UGGGGA GUGG C AU A ---A CC CGAU U GG UUCC |
| Stem-loop sequence | AAUCUGGUGCAUCCAUUUCGCAUCUAACAACAACACCAAUUUUGUGAAGCACCCCUUACACCUUCCUCCCUUGGUGGGAGGGGUUCUUCGUAAAAUUAGCUGGUGCCGUUGAAUGCAAGAUGGAUGCACCAGAUUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008645476.2 |
|
1.5 | PREDICTED: Zea mays tic20-like protein (LOC100282929), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020551532.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC100282291 (pco125364), transcript variant X1, mRNA | NA | coding protein | psRNATarget |