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BaseInfo

ncRNA ID novel_zma_miR5842
Species Zea mays
Class miRNA
Genome position Chr9:158955606-158955762 [-]
Reference genome RefGen_v4
Source SRR2647221;SRR2647389
Length 23
Mature sequence(if miRNA) 135 - CUAGGCUUCCUUUAACUAUUGGA - 157
Stem-loop(if miRNA) --  A     C     AC           -CA  GCUCCCGUUAUACAUGUCAUAUAUAUAUAUAUAUAUAUAUAUAUA
  CU GGCUU CUUUA  UAUUGGAAGCC   GG                                             U
  || ||||| |||||  |||||||||||   ||
  GA CCGAA GAGAU  AUAAUCUUCGG   AC                                             A
CG  C     A     CA           AUC  GAAAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAU
Stem-loop sequence CUAGGCUUCCUUUAACUAUUGGAAGCCCAGGGCUCCCGUUAUACAUGUCAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAAAGCACUAGGCUUCUAAUAACUAGAGAAAGCCCAGGC