ncRNA ID | novel_zma_miR5842 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:158955606-158955762 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647389 |
Length | 23 |
Mature sequence(if miRNA) | 135 - CUAGGCUUCCUUUAACUAUUGGA - 157 |
Stem-loop(if miRNA) |
--  A     C     AC           -CA  GCUCCCGUUAUACAUGUCAUAUAUAUAUAUAUAUAUAUAUAUAUA   CU GGCUU CUUUA  UAUUGGAAGCC   GG                                             U   || ||||| |||||  |||||||||||   ||   GA CCGAA GAGAU  AUAAUCUUCGG   AC                                             A CG  C     A     CA           AUC  GAAAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAU |
Stem-loop sequence | CUAGGCUUCCUUUAACUAUUGGAAGCCCAGGGCUCCCGUUAUACAUGUCAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAAAGCACUAGGCUUCUAAUAACUAGAGAAAGCCCAGGC |