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BaseInfo

ncRNA ID	novel_zma_miR5824
Species	Zea mays
Class	miRNA
Genome position	Chr8:107444131-107444274 [-]
Reference genome	RefGen_v4
Source	SRR2647221
Length	24
Mature sequence(if miRNA)	121 - ACUCACGUGCACAUUUUAAAUCUG - 144
Stem-loop(if miRNA)	--AC   C                  AA    C     C    C    A   G  -                C     UCA GUGCACAUUUUAAAUCUG  AUAU UAUUU GUAU UAAC GCA CA CUAAUUUUAUGAAGAA C     ||| ||||||||||||||||||  |||| ||||| |||| |||| ||| || ||||||||||||||||     AGU CACGUGUAAAAUUUAGAU  UGUA GUGAA CGUA GUUG UGU GU GAUUAAAAUACUUCUU U CAUU   A                  CA    A     -    A    C   G  C                U
Stem-loop sequence	ACUCACGUGCACAUUUUAAAUCUGAAAUAUCUAUUUCGUAUCUAACAGCAGCACUAAUUUUAUGAAGAACCUUUUCUUCAUAAAAUUAGCUGGUGUCGUUGAAUGCAAGUGAAUGUACUAGAUUUAAAAUGUGCACAUGAUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008661793.2	ncRNA:24   GUCUAAAUUUUACACGUGCACUCA   1   |||||||||||||||||||||||* targets:1050   CAGAUUUAAAAUGUGCACGUGAGC   1073 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661794.2	ncRNA:24   GUCUAAAUUUUACACGUGCACUCA   1   |||||||||||||||||||||||* targets:1059   CAGAUUUAAAAUGUGCACGUGAGC   1082 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020553522.1	ncRNA:24   GUCUAAAUUUUACACGUGCACUCA   1   =||||||||||||||||||||||* targets:6   UAGAUUUAAAAUGUGCACGUGAGC   29 Target Full Sequence	1.0	PREDICTED: Zea mays MACPF domain-containing protein (LOC100383384), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008645476.2	ncRNA:24   GUCUAAAUUUUACACGUGCACUCA   1   ||||||||||||||||||*||||* targets:906   CAGAUUUAAAAUGUGCACAUGAGC   929 Target Full Sequence	2.5	PREDICTED: Zea mays tic20-like protein (LOC100282929), transcript variant X1, mRNA	NA	coding protein	psRNATarget