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BaseInfo

ncRNA ID novel_zma_miR5822
Species Zea mays
Class miRNA
Genome position Chr8:133612708-133612784 [-]
Reference genome RefGen_v4
Source SRR2647221
Length 24
Mature sequence(if miRNA) 1 - GAUCGAUUCCUAAGUCCUUAGAAU - 24
Stem-loop(if miRNA) --       UU       UGGCUC    A  AUU GU  AAU
  UCUAGGG  CUUAGGA      CGAU CC   G  AG   C
  |||||||  |||||||      |||| ||   |  ||
  AGAUUCC  GAAUCCU      GCUA GG   C  UC   U
UA       -U       ----UA    -  -AU UG  AUA
Stem-loop sequence UCUAGGGUUCUUAGGAUGGCUCCGAUACCAUUGGUAGAAUCUAUACUGUCUAGGAUCGAUUCCUAAGUCCUUAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020537903.1
ncRNA:24   UAAGAUUCCUGAAUCCUUAGCUAG   1
  ||||||=|||||||||||||||||
targets:415   AUUCUAGGGACUUAGGAAUCGAUC   438

1.0 PREDICTED: Zea mays auxin-responsive protein SAUR72-like (LOC109939618), mRNA NA coding protein psRNATarget