Search result

BaseInfo

ncRNA ID osa-miRf10178-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGCACUGCAGCAGCUAUAGG - NA
Stem-loop(if miRNA)        -   GC          -    G    UG G    U   UAUC     UUCUCA
GCGUGUC GUC  UAGCUGCUGC GUGC UGCG  C UGCG GCG    UCAAA      A
||||||| |||  |||||||||| |||| ||||  | |||| |||    |||||
CGCGUAG CGG  AUCGACGACG CACG ACGU  G ACGU CGC    AGUUU      U
       U   AU          U    -    GU -    -   ---C     UCAACC
Stem-loop sequence GCGUGUCGUCGCUAGCUGCUGCGUGCGUGCGUGCGUGCGUGCGUAUCUCAAAUUCUCAAUCCAACUUUUGACCGCUGCAGUGUGCAGCACUGCAGCAGCUAUAGGCUGAUGCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK064158.1
ncRNA:20   GGAUAUCGACGACGUCACGA   1
  =||||=|||||||||*||||
targets:478   UCUAUGGCUGCUGCAUUGCU   497

2.5 Oryza sativa Japonica Group cDNA clone:002-103-F06, full insert sequence NA coding protein psRNATarget