ncRNA ID | osa-miRf10178-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - AGCACUGCAGCAGCUAUAGG - NA |
Stem-loop(if miRNA) |
       -   GC          -    G    UG G    U   UAUC     UUCUCA GCGUGUC GUC  UAGCUGCUGC GUGC UGCG  C UGCG GCG    UCAAA      A ||||||| |||  |||||||||| |||| ||||  | |||| |||    ||||| CGCGUAG CGG  AUCGACGACG CACG ACGU  G ACGU CGC    AGUUU      U        U   AU          U    -    GU -    -   ---C     UCAACC |
Stem-loop sequence | GCGUGUCGUCGCUAGCUGCUGCGUGCGUGCGUGCGUGCGUGCGUAUCUCAAAUUCUCAAUCCAACUUUUGACCGCUGCAGUGUGCAGCACUGCAGCAGCUAUAGGCUGAUGCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK064158.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-103-F06, full insert sequence | NA | coding protein | psRNATarget |