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BaseInfo

ncRNA ID	novel_zma_miR5806
Species	Zea mays
Class	miRNA
Genome position	Chr7:104624696-104624820 [+]
Reference genome	RefGen_v4
Source	SRR2647221
Length	24
Mature sequence(if miRNA)	1 - UGACUUUAUAUUGUUGUGAUAUUU - 24
Stem-loop(if miRNA)	--     U    UU    U       G  G U    U   -  AAUGA      G    UUUA   UGACU UAUA  GUUG GAUAUUU GA U UAUG GGU CA     UGCUAG AUUG    A   ||||| ||||  |||| ||||||| || | |||| ||| ||     |||||| ||||    U   ACUGG GUAU  UAGU UUAUAAA UU G GUAU UCA GU     AUGAUU UAAU    A AA     U    UU    U       G  G U    U   A  AUCGA      -    UUGU
Stem-loop sequence	UGACUUUAUAUUGUUGUGAUAUUUGGAGUUUAUGUGGUCAAAUGAUGCUAGGAUUGUUUAAUAUGUUUAAUUUAGUAAGCUAUGAACUUUAUGUGGUUGAAAUAUUUUGAUUUUAUGUGGUCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550316.1	ncRNA:24   UUUAUAGUGUUGUUAUAUUUCAGU   1   ||||||*||||||||||||||||| targets:17   AAAUAUAACAACAAUAUAAAGUCA   40 Target Full Sequence	1.0	PREDICTED: Zea mays ARF guanine-nucleotide exchange factor GNL2 (LOC103652202), mRNA	NA	coding protein	psRNATarget
XM_020545035.1	ncRNA:24   UUUAUAGUGUUGUUAUAUUUCAGU   1   ||||||*|||||||||||||*||| targets:3407   AAAUAUAACAACAAUAUAAACUCA   3430 Target Full Sequence	2.5	PREDICTED: Zea mays aconitase 2 (aco2), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020545034.1	ncRNA:24   UUUAUAGUGUUGUUAUAUUUCAGU   1   ||||||*|||||||||||||*||| targets:3090   AAAUAUAACAACAAUAUAAACUCA   3113 Target Full Sequence	2.5	PREDICTED: Zea mays aconitase 2 (aco2), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020543924.1	ncRNA:24   UUUAUAGUGUUGUUAUAUUUCAGU   1   ||||||*|||||||||||||*||| targets:46   AAAUAUAACAACAAUAUAAACUCA   69 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103637993 (LOC103637993), mRNA	NA	coding protein	psRNATarget