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BaseInfo

ncRNA ID novel_zma_miR5801
Species Zea mays
Class miRNA
Genome position Chr7:27983450-27983514 [+]
Reference genome RefGen_v4
Source SRR2647221
Length 24
Mature sequence(if miRNA) 1 - AAGUACUCGACAAAGAAGUUGUUG - 24
Stem-loop(if miRNA) --AAG      A      -   UG   C   UAU
     UACUCG CAAAGA AGU  UUG CGA   A
     |||||| |||||| |||  ||| |||
     GUGAGC GUUUUU UCG  AGC GCU   C
UUUUU      C      A   --   U   UGU
Stem-loop sequence AAGUACUCGACAAAGAAGUUGUUGCCGAUAUACUGUUCGUCGAGCUAUUUUUGCCGAGUGUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974507.1
ncRNA:24   GUUGUUGAAGAAACAGCUCAUGAA   1
  =||||=||||||||*|||||||||
targets:440   UAACAGCUUCUUUGCCGAGUACUU   463

2.5 Zea mays clone 451014 hypothetical protein mRNA, complete cds NA coding protein psRNATarget