ncRNA ID | novel_zma_miR5794 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:167230390-167230482 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647390 |
Length | 23 |
Mature sequence(if miRNA) | 71 - UGUUCUAUUUUAGUAUAUAAAUU - 93 |
Stem-loop(if miRNA) |
--              A      -UUGG            C         UGUUCUAUUUUAGU UAUAAA     CAAAUAUAGAAA UAAAAUA   |||||||||||||| ||||||     |||||||||||| ||||||G   AUAAGGUAAAAUCA AUGUUU     GUUUAUAUCUUU AUUUUGA AA              -      UAAUA            A       |
Stem-loop sequence | UGUUCUAUUUUAGUAUAUAAAUUGGCAAAUAUAGAAACUAAAAUAGAGUUUUAAUUUCUAUAUUUGAUAAUUUUGUAACUAAAAUGGAAUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ060524.1 |
|
2.5 | TSA: Zea mays contig61646, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
HI402995.1 |
|
2.5 | Sequence 1120 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB163456.1 |
|
2.5 | Sequence 1120 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ235125.1 |
|
2.5 | Sequence 1120 from Patent EP2985353 | NA | coding protein | psRNATarget |