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BaseInfo

ncRNA ID novel_zma_miR5784
Species Zea mays
Class miRNA
Genome position Chr6:64499715-64499778 [+]
Reference genome RefGen_v4
Source SRR2647221
Length 24
Mature sequence(if miRNA) 1 - GUAAAAAUCGAUUUCCAUUGGCGG - 24
Stem-loop(if miRNA) --   A          C        G  UUCU
  GUA AAAUCGAUUU CAUUGGCG UU    U
  ||| |||||||||| |||||||| ||
  CAU UUUAGCUAAA GUGACCGC AG    A
GU   C          A        G  CGCG
Stem-loop sequence GUAAAAAUCGAUUUCCAUUGGCGGUUUUCUUAGCGCGAGCGCCAGUGAAAAUCGAUUUCUACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU967628.1
ncRNA:24   GGCGGUUACCUUUAGCUAAAAAUG   1
  =||=|||||*|||||||||||*||
targets:617   UCGUCAAUGUAAAUCGAUUUUCAC   640

2.5 Zea mays clone 304952 mRNA sequence NA coding protein psRNATarget