ncRNA ID | osa-miRf10175-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - AAAAAACUUAACCUAGGAGGGG - NA |
Stem-loop(if miRNA) |
           A      C                  ------            UGAAUUU  A UCCCAAAAAAA CUUAAC UAGGAGGGGAUGUGACCU      UUCCUAGGACAA       GG C ||||||||||| |||||| ||||||||||||||||||      ||||||||||||       || U AGGGUUUUUUU GAGUUG AUCCUCCCCUACACUGGG      GAGGAUCCUGUU       CC A            -      A                  GUAGGG            ------U  C |
Stem-loop sequence | UCCCAAAAAAAACUUAACCUAGGAGGGGAUGUGACCUUUCCUAGGACAAUGAAUUUGGACUACCCUUUGUCCUAGGAGGGGAUGGGGUCACAUCCCCUCCUAAGUUGAGUUUUUUUGGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK287725.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065138D21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288732.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090063G12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015761019.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group dirigent protein 22 (LOC4349930), mRNA | dirigent protein 22(LOC4349930) | coding protein | psRNATarget |