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BaseInfo

ncRNA ID osa-miRf10175-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - AAAAAACUUAACCUAGGAGGGG - NA
Stem-loop(if miRNA)            A      C                  ------            UGAAUUU  A
UCCCAAAAAAA CUUAAC UAGGAGGGGAUGUGACCU      UUCCUAGGACAA       GG C
||||||||||| |||||| ||||||||||||||||||      ||||||||||||       || U
AGGGUUUUUUU GAGUUG AUCCUCCCCUACACUGGG      GAGGAUCCUGUU       CC A
           -      A                  GUAGGG            ------U  C
Stem-loop sequence UCCCAAAAAAAACUUAACCUAGGAGGGGAUGUGACCUUUCCUAGGACAAUGAAUUUGGACUACCCUUUGUCCUAGGAGGGGAUGGGGUCACAUCCCCUCCUAAGUUGAGUUUUUUUGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK287725.1
ncRNA:22   GGGGAGGAUCCAAUUCAAAAAA   1
  =|||||||=||||=||||||||
targets:1572   UCCCUCCUGGGUUGAGUUUUUU   1593

2.5 Oryza sativa Japonica Group cDNA, clone: J065138D21, full insert sequence NA coding protein psRNATarget
AK288732.1
ncRNA:22   GGGGAGGAUCCAAUUCAAAAAA   1
  ||||||=|||*|||||||||||
targets:1250   CCCCUCUUAGAUUAAGUUUUUU   1271

2.5 Oryza sativa Japonica Group cDNA, clone: J090063G12, full insert sequence NA coding protein psRNATarget
XM_015761019.1
ncRNA:22   GGGGAGGAUCCAAUUCAAAAAA   1
  |=|||=|||*||||||||||||
targets:102   CUCCUUCUAAGUUAAGUUUUUU   123

2.5 PREDICTED: Oryza sativa Japonica Group dirigent protein 22 (LOC4349930), mRNA dirigent protein 22(LOC4349930) coding protein psRNATarget