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BaseInfo

ncRNA ID novel_zma_miR5775
Species Zea mays
Class miRNA
Genome position Chr6:96814342-96814391 [-]
Reference genome RefGen_v4
Source SRR2647221
Length 23
Mature sequence(if miRNA) 1 - UUAUCCGAUGUCUAAACACAGUU - 23
Stem-loop(if miRNA) --   -      UUGA  -        A
  CUG GUUUAG    AC UCGGAUAA A
  ||| ||||||    || ||||||||
  GAC CAAAUC    UG AGCCUAUU A
UU   A      ----  U        A
Stem-loop sequence CUGGUUUAGUUGAACUCGGAUAAAAAAUUAUCCGAUGUCUAAACACAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539104.1
ncRNA:23   UUGACACAAAUCUGUAGCCUAUU   1
  |||||||**||||||||||||||
targets:366   AACUGUGCCUAGACAUCGGAUAA   388

2.0 PREDICTED: Zea mays uncharacterized LOC100383786 (LOC100383786), transcript variant X1, mRNA NA coding protein psRNATarget