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BaseInfo

ncRNA ID	novel_zma_miR5774
Species	Zea mays
Class	miRNA
Genome position	Chr5:38609515-38609576 [-]
Reference genome	RefGen_v4
Source	SRR1618883
Length	24
Mature sequence(if miRNA)	39 - AAUUUUACGAAGAACCCCUCCCAC - 62
Stem-loop(if miRNA)	--      AC           C     AGGG   AAUUUU  GAAGAACCCCU CCACC    A   ||||||  ||||||||||| |||||   UUAAAA  CUUCUUGGGGA GGUGG    A GG      CA           A     AAGG
Stem-loop sequence	AAUUUUACGAAGAACCCCUCCCACCAGGGAAGGAAGGUGGAAGGGGUUCUUCACAAAAUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT064809.1	ncRNA:24   CACCCUCCCCAAGAAGCAUUUUAA   1   |*|||||||||||||=|||||||| targets:1012   GAGGGAGGGGUUCUUUGUAAAAUU   1035 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0167E07 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020538815.1	ncRNA:24   CACCCUCCCCAAGAAGCAUUUUAA   1   |*|||||||||||||=|||||||| targets:1042   GAGGGAGGGGUUCUUUGUAAAAUU   1065 Target Full Sequence	1.5	PREDICTED: Zea mays Ribosome-recycling factor chloroplastic (LOC100217177), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU957184.1	ncRNA:24   CACCCUCCCCAAGAAGCAUUUUAA   1   |*|||||||||||||=|||||||| targets:2087   GGGGGAGGGGUUCUUUGUAAAAUU   2110 Target Full Sequence	1.5	Zea mays clone 1585268 cytochrome c1, heme protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008661793.2	ncRNA:24   CACCCUCCCCAAGAAGCAUUUUAA   1   |||**||||||||||=|||||||| targets:995   GUGAAAGGGGUUCUUUGUAAAAUU   1018 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661794.2	ncRNA:24   CACCCUCCCCAAGAAGCAUUUUAA   1   |||**||||||||||=|||||||| targets:1004   GUGAAAGGGGUUCUUUGUAAAAUU   1027 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EZ074109.1	ncRNA:24   CACCCUCCCCAAGAAGCAUUUUAA   1   |*|*||*||||||||||||*|||| targets:83   GAGCGACGGGUUCUUCGUACAAUU   106 Target Full Sequence	2.5	TSA: Zea mays contig09746, mRNA sequence	NA	coding protein	psRNATarget
EZ081922.1	ncRNA:20   CUCCCCAAGAAGCAUUUUAA   1   **||||||||||*||||||| targets:1   UCGGGGUUCUUCAUAAAAUU   20 Target Full Sequence	2.5	TSA: Zea mays contig17564, mRNA sequence	NA	coding protein	psRNATarget