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BaseInfo

ncRNA ID novel_zma_miR5767
Species Zea mays
Class miRNA
Genome position Chr5:39817024-39817074 [-]
Reference genome RefGen_v4
Source SRR1618883;SRR4237223;SRR4237225;SRR4237226
Length 24
Mature sequence(if miRNA) 28 - AUUAGUUAGACUGUUAGAACGCCU - 51
Stem-loop(if miRNA) --AU       A         --C  C
    UAGUUAG CUGUUAGAA   GC U
    ||||||| |||||||||   ||
    AUCAAUC GAUAAUUUU   CG C
AAUU       -         AAU  A
Stem-loop sequence AUUAGUUAGACUGUUAGAACGCCUCAGCUAAUUUUAAUAGCUAACUAUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545827.1
ncRNA:24   UCCGCAAGAUUGUCAGAUUGAUUA   1
  ||*|*|||*|||||||||=|||||
targets:971   AGACAUUCAAACAGUCUAGCUAAU   994

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like (LOC103641135), transcript variant X11, mRNA NA coding protein psRNATarget