ncRNA ID | novel_zma_miR5765 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:95206140-95206234 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647388 |
Length | 23 |
Mature sequence(if miRNA) | 73 - UUUCAAUAACUAGAGGAAGCUCU - 95 |
Stem-loop(if miRNA) |
--           C      GG GCC  G      U    C    ACU   GGCUUCUUUUA UUAUUG  A   CA GGCUUC AAUA UAUA   A   ||||||||||| ||||||  |   || |||||| |||| ||||   UCGAAGGAGAU AAUAAC  U   GU CCGAGG UUAU AUAU   U UC           C      UU AUA  A      U    -    AUA |
Stem-loop sequence | GGCUUCUUUUACUUAUUGGGAGCCCAGGGCUUCUAAUACUAUAACUAUAUAUAUAUAUUUGGAGCCAUGAUAUUUCAAUAACUAGAGGAAGCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU947983.1 |
|
1.5 | Zea mays clone 368195 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU940867.1 |
|
1.5 | Zea mays clone 1165252 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY155581.1 |
|
1.5 | Zea mays 1-aminocyclopropane-1-carboxylic acid oxidase (acco1) mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
EU962914.1 |
|
1.5 | Zea mays clone 246509 mRNA sequence | NA | coding protein | psRNATarget |