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BaseInfo

ncRNA ID novel_zma_miR5764
Species Zea mays
Class miRNA
Genome position Chr5:90706990-90707188 [+]
Reference genome RefGen_v4
Source SRR2647221
Length 24
Mature sequence(if miRNA) 176 - GUGAUUGUCUACAAUAUAAAAGGU - 199
Stem-loop(if miRNA) --        C    U   C         A A            C                                     C      C      -  U
  CUUUUAUA UGUA ACA AUCACAGGC G UUUUUAGAAAAA UGUUUGUGAUAUAUAACAUCACAGGCGCUUUUUUAUU UGACCG CUGUGA AG U
  |||||||| |||| ||| ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| || A
  GAAAAUAU ACAU UGU UAGUGUCCG C AAAAAUCUUUUU ACGAACACUAUAUAUUGUAGUGUUCGCGAAAAAAUAA GCUGGC GACACU UC A
UG        A    C   -         C A            U                                     A      A      A  U
Stem-loop sequence CUUUUAUACUGUAUACACAUCACAGGCAGAUUUUUAGAAAAACUGUUUGUGAUAUAUAACAUCACAGGCGCUUUUUUAUUCUGACCGCCUGUGAAGUUAAUCUAUCACAGACGGUCGAAAUAAAAAAGCGCUUGUGAUGUUAUAUAUCACAAGCAUUUUUUCUAAAAAACCGCCUGUGAUUGUCUACAAUAUAAAAGGU