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BaseInfo

ncRNA ID novel_zma_miR5762
Species Zea mays
Class miRNA
Genome position Chr10:145563832-145563942 [-]
Reference genome RefGen_v4
Source SRR2647221;SRR2647389
Length 24
Mature sequence(if miRNA) 88 - UUGCUCUCAAUCCAUGUGGAUUAG - 111
Stem-loop(if miRNA) --UUGC  UC A            AG           U    U    UCCUAAUCA
      UC  A UCCAUGUGGAUU  GUGGGAUUGAG GGUU UAAA         A
      ||  | ||||||||||||  ||||||||||| |||| ||||
      AG  U GGGUACACUUAA  UACUCUGACUU UUAA AUUU         G
CUAAUA  GA A            CU           -    U    UCUAAAACU
Stem-loop sequence UUGCUCUCAAUCCAUGUGGAUUAGGUGGGAUUGAGUGGUUUUAAAUCCUAAUCAAGUCAAAAUCUUUUAUAAUUUUCAGUCUCAUUCAAUUCACAUGGGAUAGGAAUAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT066441.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*||||||||||||||||||||||
targets:1540   CCAAUCCACAUGGAUUGAGAGCAA   1563

0.0 Zea mays full-length cDNA clone ZM_BFc0165B04 mRNA, complete cds NA coding protein psRNATarget
XM_008678390.2
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*||||||||||||||||||||||
targets:1824   CCAAUCCACAUGGAUUGAGAGCAA   1847

0.0 PREDICTED: Zea mays RNA-binding motif protein, X-linked 2 (LOC100282627), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008678388.2
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*||||||||||||||||||||||
targets:1840   CCAAUCCACAUGGAUUGAGAGCAA   1863

0.0 PREDICTED: Zea mays RNA-binding motif protein, X-linked 2 (LOC100282627), transcript variant X1, mRNA NA coding protein psRNATarget
LQ235149.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCG-UU   1
  =|||||||||||||||||||||-||
targets:111   UUAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1144 from Patent EP2985353 NA coding protein psRNATarget
JB163480.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCG-UU   1
  =|||||||||||||||||||||-||
targets:111   UUAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1144 from Patent EP2559767 NA coding protein psRNATarget
HI403019.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCG-UU   1
  =|||||||||||||||||||||-||
targets:111   UUAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1144 from Patent EP2074227 NA coding protein psRNATarget
EU948930.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCGUU   1
  ||-||||=|||||||||||||||||
targets:432   CUCAAUCUACAUGGAUUGAGAGCAA   456

1.0 Zea mays clone 390579 mRNA sequence NA coding protein psRNATarget
XM_020546135.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCGUU   1
  ||-||||=|||||||||||||||||
targets:3144   CUCAAUCUACAUGGAUUGAGAGCAA   3168

1.0 PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103642139), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546136.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCGUU   1
  ||-||||=|||||||||||||||||
targets:3291   CUCAAUCUACAUGGAUUGAGAGCAA   3315

1.0 PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103642139), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008657579.2
ncRNA:24   GAUUAGGUGUACCUAACUCUCG-UU   1
  =|||||||||||||||||||||-||
targets:7158   UUAAUCCACAUGGAUUGAGAGCUAA   7182

3.0 PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008657578.2
ncRNA:24   GAUUAGGUGUACCUAACUCUCG-UU   1
  =|||||||||||||||||||||-||
targets:7262   UUAAUCCACAUGGAUUGAGAGCUAA   7286

3.0 PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020542399.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCG-UU   1
  =|||||||||||||||||||||-||
targets:7273   UUAAUCCACAUGGAUUGAGAGCUAA   7297

3.0 PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X3, mRNA NA coding protein psRNATarget
EZ092645.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:28   CUCAAUCCACAUGGAUUGAGAGCUAA   53

3.0 TSA: Zea mays contig28294, mRNA sequence NA coding protein psRNATarget
HI405893.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4018 from Patent EP2074227 NA coding protein psRNATarget
LQ238019.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4014 from Patent EP2985353 NA coding protein psRNATarget
HI405903.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4028 from Patent EP2074227 NA coding protein psRNATarget
LQ238033.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4028 from Patent EP2985353 NA coding protein psRNATarget
JB166350.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4014 from Patent EP2559767 NA coding protein psRNATarget
HI405889.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4014 from Patent EP2074227 NA coding protein psRNATarget
LQ238023.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4018 from Patent EP2985353 NA coding protein psRNATarget
JB166354.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4018 from Patent EP2559767 NA coding protein psRNATarget
JB166364.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:91   CUCAAUCCACAUGGAUUGAGAGCUAA   116

3.0 Sequence 4028 from Patent EP2559767 NA coding protein psRNATarget
LQ238007.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:99   CUCAAUCCACAUGGAUUGAGAGCUAA   124

3.0 Sequence 4002 from Patent EP2985353 NA coding protein psRNATarget
JB166338.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:99   CUCAAUCCACAUGGAUUGAGAGCUAA   124

3.0 Sequence 4002 from Patent EP2559767 NA coding protein psRNATarget
HI405877.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:99   CUCAAUCCACAUGGAUUGAGAGCUAA   124

3.0 Sequence 4002 from Patent EP2074227 NA coding protein psRNATarget
HI405841.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:101   CUCAAUCCACAUGGAUUGAGAGCUAA   126

3.0 Sequence 3966 from Patent EP2074227 NA coding protein psRNATarget
JB166302.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:101   CUCAAUCCACAUGGAUUGAGAGCUAA   126

3.0 Sequence 3966 from Patent EP2559767 NA coding protein psRNATarget
LQ237971.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:101   CUCAAUCCACAUGGAUUGAGAGCUAA   126

3.0 Sequence 3966 from Patent EP2985353 NA coding protein psRNATarget
JB166339.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:103   CUCAAUCCACAUGGAUUGAGAGCUAA   128

3.0 Sequence 4003 from Patent EP2559767 NA coding protein psRNATarget
LQ238008.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:103   CUCAAUCCACAUGGAUUGAGAGCUAA   128

3.0 Sequence 4003 from Patent EP2985353 NA coding protein psRNATarget
HI405878.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:103   CUCAAUCCACAUGGAUUGAGAGCUAA   128

3.0 Sequence 4003 from Patent EP2074227 NA coding protein psRNATarget
LQ235150.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1145 from Patent EP2985353 NA coding protein psRNATarget
HI403020.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1145 from Patent EP2074227 NA coding protein psRNATarget
JB163481.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1145 from Patent EP2559767 NA coding protein psRNATarget
HI403094.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1219 from Patent EP2074227 NA coding protein psRNATarget
LQ235224.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1219 from Patent EP2985353 NA coding protein psRNATarget
LQ235220.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1215 from Patent EP2985353 NA coding protein psRNATarget
JB163551.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1215 from Patent EP2559767 NA coding protein psRNATarget
JB163555.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1219 from Patent EP2559767 NA coding protein psRNATarget
HI403090.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:110   CUCAAUCCACAUGGAUUGAGAGCUAA   135

3.0 Sequence 1215 from Patent EP2074227 NA coding protein psRNATarget
EU942673.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:103   CUCAAUCCACAUGGAUUGAGAGCUAA   128

3.0 Zea mays clone 1529344 mRNA sequence NA coding protein psRNATarget
BT086633.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:467   CUCAAUCCACAUGGAUUGAGAGCUAA   492

3.0 Zea mays full-length cDNA clone ZM_BFa0068P14 mRNA, complete cds NA coding protein psRNATarget
BT062183.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:258   CUCAAUCCACAUGGAUUGAGAGCUAA   283

3.0 Zea mays full-length cDNA clone ZM_BFb0224O15 mRNA, complete cds NA coding protein psRNATarget
EU951448.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:757   CUCAAUCCACAUGGAUUGAGAGCUAA   782

3.0 Zea mays clone 701961 mRNA sequence NA coding protein psRNATarget
XM_020552889.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:886   CUCAAUCCACAUGGAUUGAGAGCUAA   911

3.0 PREDICTED: Zea mays pre-mRNA-splicing factor CWC21-like (LOC103654764), transcript variant X5, mRNA NA coding protein psRNATarget
AY103719.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:890   CUCAAUCCACAUGGAUUGAGAGCUAA   915

3.0 Zea mays PCO137008 mRNA sequence NA coding protein psRNATarget
BT085319.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:188   CUCAAUCCACAUGGAUUGAGAGCUAA   213

3.0 Zea mays full-length cDNA clone ZM_BFb0375P22 mRNA, complete cds NA coding protein psRNATarget
NM_001147844.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1136   CUCAAUCCACAUGGAUUGAGAGCUAA   1161

3.0 Zea mays Phytanoyl-CoA dioxygenase (LOC100273407), mRNA NA coding protein psRNATarget
BT041052.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1136   CUCAAUCCACAUGGAUUGAGAGCUAA   1161

3.0 Zea mays full-length cDNA clone ZM_BFc0169K03 mRNA, complete cds NA coding protein psRNATarget
NM_001176594.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1140   CUCAAUCCACAUGGAUUGAGAGCUAA   1165

3.0 Zea mays uncharacterized LOC100383981 (LOC100383981), mRNA NA coding protein psRNATarget
BT068797.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1140   CUCAAUCCACAUGGAUUGAGAGCUAA   1165

3.0 Zea mays full-length cDNA clone ZM_BFb0382L20 mRNA, complete cds NA coding protein psRNATarget
BT069115.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:540   CUCAAUCCACAUGGAUUGAGAGCUAA   565

3.0 Zea mays full-length cDNA clone ZM_BFb0186N21 mRNA, complete cds NA coding protein psRNATarget
BT066987.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1427   CUCAAUCCACAUGGAUUGAGAGCUAA   1452

3.0 Zea mays full-length cDNA clone ZM_BFb0138F03 mRNA, complete cds NA coding protein psRNATarget
BT088232.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1542   CUCAAUCCACAUGGAUUGAGAGCUAA   1567

3.0 Zea mays full-length cDNA clone ZM_BFc0086F14 mRNA, complete cds NA coding protein psRNATarget
NM_001279968.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1542   CUCAAUCCACAUGGAUUGAGAGCUAA   1567

3.0 Zea mays putative methyltransferase PMT15 (LOC101027245), mRNA NA coding protein psRNATarget
XM_008645912.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1631   CUCAAUCCACAUGGAUUGAGAGCUAA   1656

3.0 PREDICTED: Zea mays uncharacterized LOC100383981 (LOC100383981), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001154031.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1827   CUCAAUCCACAUGGAUUGAGAGCUAA   1852

3.0 Zea mays uncharacterized LOC100281112 (LOC100281112), mRNA NA coding protein psRNATarget
EU955633.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1827   CUCAAUCCACAUGGAUUGAGAGCUAA   1852

3.0 Zea mays clone 1540038 transposon protein mRNA, complete cds NA coding protein psRNATarget
XM_020553538.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1898   CUCAAUCCACAUGGAUUGAGAGCUAA   1923

3.0 PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008645867.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1964   CUCAAUCCACAUGGAUUGAGAGCUAA   1989

3.0 PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008664276.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2059   CUCAAUCCACAUGGAUUGAGAGCUAA   2084

3.0 PREDICTED: Zea mays DEAD-box ATP-dependent RNA helicase 27 (LOC103640803), transcript variant X2, mRNA NA coding protein psRNATarget
BT018903.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2041   CUCAAUCCACAUGGAUUGAGAGCUAA   2066

3.0 Zea mays clone EL01T0208C03.d mRNA sequence NA coding protein psRNATarget
XM_008664275.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2152   CUCAAUCCACAUGGAUUGAGAGCUAA   2177

3.0 PREDICTED: Zea mays DEAD-box ATP-dependent RNA helicase 27 (LOC103640803), transcript variant X1, mRNA NA coding protein psRNATarget
BT063416.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2092   CUCAAUCCACAUGGAUUGAGAGCUAA   2117

3.0 Zea mays full-length cDNA clone ZM_BFc0061L20 mRNA, complete cds NA coding protein psRNATarget
XM_008661718.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2223   CUCAAUCCACAUGGAUUGAGAGCUAA   2248

3.0 PREDICTED: Zea mays serine/arginine repetitive matrix protein 1 (LOC103638926), mRNA NA coding protein psRNATarget
NM_001154362.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2164   CUCAAUCCACAUGGAUUGAGAGCUAA   2189

3.0 Zea mays protein kinase domain containing protein (LOC100281444), mRNA NA coding protein psRNATarget
EU956718.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2165   CUCAAUCCACAUGGAUUGAGAGCUAA   2190

3.0 Zea mays clone 1571610 protein kinase domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008674604.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2293   CUCAAUCCACAUGGAUUGAGAGCUAA   2318

3.0 PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020549704.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2300   CUCAAUCCACAUGGAUUGAGAGCUAA   2325

3.0 PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020549703.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2360   CUCAAUCCACAUGGAUUGAGAGCUAA   2385

3.0 PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008679547.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2512   CUCAAUCCACAUGGAUUGAGAGCUAA   2537

3.0 PREDICTED: Zea mays putative methyltransferase PMT15 (LOC101027245), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020541449.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2812   CUCAAUCCACAUGGAUUGAGAGCUAA   2837

3.0 PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001175969.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1970   CUCAAUCCACAUGGAUUGAGAGCUAA   1995

3.0 Zea mays uncharacterized LOC100383311 (LOC100383311), mRNA NA coding protein psRNATarget
BT066874.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1970   CUCAAUCCACAUGGAUUGAGAGCUAA   1995

3.0 Zea mays full-length cDNA clone ZM_BFb0081D21 mRNA, complete cds NA coding protein psRNATarget
XM_020541448.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:2916   CUCAAUCCACAUGGAUUGAGAGCUAA   2941

3.0 PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008674377.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:3406   CUCAAUCCACAUGGAUUGAGAGCUAA   3431

3.0 PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008674376.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:3419   CUCAAUCCACAUGGAUUGAGAGCUAA   3444

3.0 PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008674375.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:3450   CUCAAUCCACAUGGAUUGAGAGCUAA   3475

3.0 PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020549843.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1093   CUCAAUCCACAUGGAUUGAGAGCUAA   1118

3.0 PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020549841.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1211   CUCAAUCCACAUGGAUUGAGAGCUAA   1236

3.0 PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020549842.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1211   CUCAAUCCACAUGGAUUGAGAGCUAA   1236

3.0 PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008658241.2
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:1241   CUCAAUCCACAUGGAUUGAGAGCUAA   1266

3.0 PREDICTED: Zea mays probable peptidyl-tRNA hydrolase 2 (LOC103635865), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020545430.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:5816   CUCAAUCCACAUGGAUUGAGAGCUAA   5841

3.0 PREDICTED: Zea mays uncharacterized LOC109942872 (LOC109942872), mRNA NA coding protein psRNATarget
XM_020539703.1
ncRNA:24   GA-UUAGGUGUACCUAACUCUCG-UU   1
  ||-||||||||||||||||||||-||
targets:72   CUCAAUCCACAUGGAUUGAGAGCUAA   97

3.0 PREDICTED: Zea mays uncharacterized LOC109940256 (LOC109940256), transcript variant X1, mRNA NA coding protein psRNATarget
JB167285.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||*||||||||||||
targets:80   CCAAUCCACAUAGAUUGAGAGCAA   103

1.5 Sequence 4949 from Patent EP2559767 NA coding protein psRNATarget
HI406824.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||*||||||||||||
targets:80   CCAAUCCACAUAGAUUGAGAGCAA   103

1.5 Sequence 4949 from Patent EP2074227 NA coding protein psRNATarget
LQ238954.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||*||||||||||||
targets:80   CCAAUCCACAUAGAUUGAGAGCAA   103

1.5 Sequence 4949 from Patent EP2985353 NA coding protein psRNATarget
EZ077834.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:59   CCAAUCCACAUGGAUUGAGAGGAA   82

1.5 TSA: Zea mays contig13473, mRNA sequence NA coding protein psRNATarget
EU945995.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:566   CCAAUCCACAUGGAUUGAGAGAAA   589

1.5 Zea mays clone 293035 mRNA sequence NA coding protein psRNATarget
BT087300.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:1034   CCAAUCCACAUGGAUUGAGAGGAA   1057

1.5 Zea mays full-length cDNA clone ZM_BFb0032O11 mRNA, complete cds NA coding protein psRNATarget
XM_008647186.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:1067   CCAAUCCACAUGGAUUGAGAGGAA   1090

1.5 PREDICTED: Zea mays B3 domain-containing protein (LOC100192994), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001138165.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:1229   CCAAUCCACAUGGAUUGAGAGGAA   1252

1.5 Zea mays B3 domain-containing protein (LOC100192994), mRNA NA coding protein psRNATarget
BT035134.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:1229   CCAAUCCACAUGGAUUGAGAGGAA   1252

1.5 Zea mays full-length cDNA clone ZM_BFb0041I21 mRNA, complete cds NA coding protein psRNATarget
EU957033.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*||||||||||||*|||||||||
targets:1411   CCAAUCCACAUGGAAUGAGAGCAA   1434

1.5 Zea mays clone 1581039 mRNA sequence NA coding protein psRNATarget
EU957741.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*||||||||||||*|||||||||
targets:1412   CCAAUCCACAUGGAAUGAGAGCAA   1435

1.5 Zea mays clone 1613489 mRNA sequence NA coding protein psRNATarget
XM_020538633.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:3945   CCAAUCCACAUGGAUUGAGAGAAA   3968

1.5 PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X5, mRNA NA coding protein psRNATarget
XM_008647808.2
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:4058   CCAAUCCACAUGGAUUGAGAGAAA   4081

1.5 PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020538630.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:4097   CCAAUCCACAUGGAUUGAGAGAAA   4120

1.5 PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020538631.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:4845   CCAAUCCACAUGGAUUGAGAGAAA   4868

1.5 PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020538632.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:4846   CCAAUCCACAUGGAUUGAGAGAAA   4869

1.5 PREDICTED: Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), transcript variant X4, mRNA NA coding protein psRNATarget
NM_001350089.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*|||||||||||||||||||*||
targets:5908   CCAAUCCACAUGGAUUGAGAGAAA   5931

1.5 Zea mays transcription factor TFIIIB component B'' homolog (LOC100304161), mRNA NA coding protein psRNATarget
JB166325.1
ncRNA:24   GAUU-AGGUGUACCUAACUCUCGUU   1
  ||||-|*|||||||||||||||||*
targets:101   CUAAAUGCACAUGGAUUGAGAGCAU   125

2.0 Sequence 3989 from Patent EP2559767 NA coding protein psRNATarget
LQ237994.1
ncRNA:24   GAUU-AGGUGUACCUAACUCUCGUU   1
  ||||-|*|||||||||||||||||*
targets:101   CUAAAUGCACAUGGAUUGAGAGCAU   125

2.0 Sequence 3989 from Patent EP2985353 NA coding protein psRNATarget
HI405864.1
ncRNA:24   GAUU-AGGUGUACCUAACUCUCGUU   1
  ||||-|*|||||||||||||||||*
targets:101   CUAAAUGCACAUGGAUUGAGAGCAU   125

2.0 Sequence 3989 from Patent EP2074227 NA coding protein psRNATarget
XM_008660174.2
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*||||=|||||||||*|||||||
targets:3605   CCAAUCUACAUGGAUUAAGAGCAA   3628

2.5 PREDICTED: Zea mays Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic (LOC100276880), transcript variant X2, mRNA NA coding protein psRNATarget
EU954940.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*||||||*|||||||||||*|||
targets:1057   CCAAUCCAAAUGGAUUGAGAACAA   1080

2.5 Zea mays clone 1494218 tumor-related protein mRNA, complete cds NA coding protein psRNATarget
NM_001153881.1
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  |*||||||*|||||||||||*|||
targets:1057   CCAAUCCAAAUGGAUUGAGAACAA   1080

2.5 Zea mays Tumor protein (LOC100280961), mRNA NA coding protein psRNATarget
BT064276.2
ncRNA:24   GAUUAGGUGUACCUAACUCUCGUU   1
  ***|||||=|||||||||||*|||
targets:1764   GGUAUCCAUAUGGAUUGAGAUCAA   1787

2.5 Zea mays full-length cDNA clone ZM_BFc0155A03 mRNA, complete cds NA coding protein psRNATarget
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